Helicobacter pylori Gambia94/24: HPGAM_00975
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Entry
HPGAM_00975 CDS
T01917
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg00020
Citrate cycle (TCA cycle)
heg00190
Oxidative phosphorylation
heg00620
Pyruvate metabolism
heg00650
Butanoate metabolism
heg00720
Other carbon fixation pathways
heg01100
Metabolic pathways
heg01110
Biosynthesis of secondary metabolites
heg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HPGAM_00975 (frdB)
00620 Pyruvate metabolism
HPGAM_00975 (frdB)
00650 Butanoate metabolism
HPGAM_00975 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HPGAM_00975 (frdB)
00720 Other carbon fixation pathways
HPGAM_00975 (frdB)
Enzymes [BR:
heg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HPGAM_00975 (frdB)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
HPGAM_00975 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_16
Fer4_17
Fer4_9
Fer2
Silic_transp
Fer4_10
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
ADU81045
LinkDB
All DBs
Position
complement(195776..196513)
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AA seq
245 aa
AA seq
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MSDNERTIVVRVLKFDPQSAVSKPHFKEYQLKETPSMTLFIALNLIREHQDPDLSFDFVC
RAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFLDMTKK
VESWAHSKEEVDITKPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRPNFIGAAGMN
RAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK
VGKSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatgaacgaacgattgtagttagagtgttaaaatttgaccctcaaagcgcg
gtgagtaagccgcattttaaagagtatcaattgaaagaaacgccatccatgacgctcttt
atcgctttaaacctcattagagagcatcaagatccggatttgagctttgattttgtgtgc
cgtgctgggatttgcggctcttgcgcgatgatggttaatgggagaccgaggctagcttgt
aaaaccctaacttctagctttgaaaacggggtgatcacgctcatgcccatgcccagtttt
acgctcattaaagatttgagcgtgaataccggcgattggtttttggatatgactaaaaag
gtggagagttgggcgcattctaaagaagaagtggatattactaagccggaaaaaagggtt
gagcctgatgaagcccaagaagtctttgaattagacaggtgtattgaatgcgggtgctgt
atcgcttcttgcgggaccaaactcatgcgccctaatttcattggagctgctggcatgaac
agagccatgcgtttcatgattgacagccacgatgaaagaagcgatgacgatttttatgaa
ttagtcggcgatgatgatggtgtttttgggtgcatgagcttgatcgcttgccatgacact
tgccctaaagaattacccttacaaagcagtatcgctactttgcgtaaccgaatgttgaaa
gtgggtaaaagccgctaa
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