Helicobacter pylori Gambia94/24: HPGAM_01215
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Entry
HPGAM_01215 CDS
T01917
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
heg
Helicobacter pylori Gambia94/24
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
heg03016
]
HPGAM_01215
03036 Chromosome and associated proteins [BR:
heg03036
]
HPGAM_01215
Transfer RNA biogenesis [BR:
heg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPGAM_01215
Prokaryotic type
HPGAM_01215
Chromosome and associated proteins [BR:
heg03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPGAM_01215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADU81093
LinkDB
All DBs
Position
complement(235684..237549)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEIVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDKQEIQENLKRLKEC
VLTPSKEVLKRLNELDENPINDKMDGVSLLARDSFNAEKMRSFFSFLAPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggggggcatgcgggcattgaagcgagc
ttgattgcggctaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttagcaagctgtaatccggccattgggggcttgggtaaagggcatttgactaaagaa
gtggatgttttagggggggctatggggattattacagatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcggttagggggactagagcgcaaattgatatggat
acttaccgcatttttgcaagaaatctcgttttaaacacccctaatttgagcgtctctcaa
gaaatgaccgaaagtttaatccttgaaaacgatgagatagtgggcgtaaccacgaacatt
aataatacttacagagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgaacaccaaaaccaaaacgggcgctttggggaaaacgcttccaattct
ttagccttgaatttaagggagcttggctttaaggtggagaggttaaaaaccggcacttgc
ccaagagtggccggcaatagcattgattttgaaggcttagaagagcattttggggataca
aaccctccctatttcagctataaaactaaagattttaaccccacccaactctcttgcttc
atcacttacactaaccccattacccaccaaatcattagagataatttccaccgagccccc
ctttttagcggtcaaattgaaggcataggccctaggtattgccctagcattgaagataaa
atcaaccgcttcagtgaaaaagaacgccaccagctgtttttagagcctcaaaccattcac
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagacgtgcaagaaaag
gtcattcactctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgattttatccagcctacagaattgacccacgctttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggctgggattaatgcggtgttagccttaaagaatcaagccccctttatttta
aaacgcaatgaagcctatatcggcgttttgattgatgatttggttactaaaggcacgaat
gagccttacagaatgtttaccagccgggccgaataccgcttgcttttaagagaagacaac
acgctttttaggttgggcgaacatgcctatcgtttagggcttatggaacaggatttttat
aaggaattaaaaaaagacaaacaagagatacaagaaaacttgaaacgccttaaagaatgc
gtgcttacccctagcaaagaagtgttaaaacgcttgaatgaattagatgaaaaccctatc
aatgacaaaatggatggcgtcagtcttttagcgcgcgatagttttaatgcagaaaaaatg
cgctccttttttagctttttagcccccttgaatgagcgggttttagagcaaatcaaaatt
gaatgcaagtataatatttatattgaaaaacaacacgaaaatatcgctaaaatggacagc
atgctcaaagtgtctatccctaaacattttgtgtttaaaggcattccaggccttagttta
gaagcggtagaaaagttagaaaaattccgccccaaaagcctttttgaagcctcagaaatc
agcgggatcaccccggcgaatttagacgttttgcatttatacattcatttgcggaaaaac
tcttaa
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