Helicobacter pylori Gambia94/24: HPGAM_02235
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Entry
HPGAM_02235 CDS
T01917
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg02020
Two-component system
heg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPGAM_02235 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPGAM_02235 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
heg03021
]
HPGAM_02235 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
heg02035
]
HPGAM_02235 (fliA)
Transcription machinery [BR:
heg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPGAM_02235 (fliA)
Bacterial motility proteins [BR:
heg02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPGAM_02235 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
MarR
MarR_2
TetR_C_44
KORA
HTH_34
HTH_10
DUF3209
DUF4202
HsdM_N
DUF7440
Motif
Other DBs
NCBI-ProteinID:
ADU81293
LinkDB
All DBs
Position
439093..439860
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AA seq
255 aa
AA seq
DB search
MILMMENRMPKEIQKTEASEKSIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERL
PSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSSRK
LIKSIDIEITKYLNEHGKEPSDAYLAEALGENIEKIREAKTASDIYALVPIDEQFNAIEQ
DEITQKIEAEELLEHVQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIK
EVIKKVRQSLGVDHG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactgaagcgagcgaa
aaaagtatagaaaaggttttgaacgcctatgacaagcaacaacaccaccatcaagacgcg
ctcgctatccagtatctaccggccgtgcgcgctatggcgtttcgtttaaaagagcgtttg
cccagctctattgattttaacgatctggtttctattggcactgaagagttgattaaatta
gccaggcgttatgagagcgcgttaaacgattctttttgggggtatgcgaagactcgtgtc
aatggggcgatgttagattatttgcgttctttagatgtgatttctcgctctagcaggaag
ctcattaaaagcattgatattgaaatcaccaaataccttaatgagcatgggaaagagcct
agcgatgcgtatttagcagaagctttaggcgagaatattgaaaagattagagaagccaaa
acggcctcagatatttatgcgttagtgccaatagatgagcaattcaatgcgatcgaacaa
gatgaaatcactcaaaagattgaagcagaagagttgttagagcatgtccaaaaagtattg
aatcaaatgagcgaaagagagcaaatccttatccagctctattactttgaagagttgaat
ttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaaatcattaaa
gaagtgattaaaaaggtgcgccaatccttaggagtggatcatggctga
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integrated database retrieval system
