KEGG   Helicobacter pylori Gambia94/24: HPGAM_02680
Entry
HPGAM_02680       CDS       T01917                                 
Name
(GenBank) CAG pathogenicity island protein 5
  KO
K12090  cag pathogenicity island protein 5
Organism
heg  Helicobacter pylori Gambia94/24
Module
heg_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:heg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:heg02044]
    HPGAM_02680
Secretion system [BR:heg02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPGAM_02680
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ADU81378
LinkDB
Position
complement(533116..535362)
AA seq 748 aa
MEDFLYNALYFIEDYKLVVIFSFIGLIALFFLYKFIKTQKKVFKDKANQPQKKKSFKEII
IDGLKERVKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNKLPESDDDLFDIWVYAI
QDFPAYYFKALTFSSLKIYGFNISLVVYSSILCSYIFITFFVWFLKYLTRTRDIGANKKV
DDLFGSASWETEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPT
RSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNP
FAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFS
NQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNME
KVVSLMEFFGGEEDKSGDNLRALSPATRNMWNNFKTMGGARETYSSVQGVYTSAFAPYNN
AMIRNFTSANDFDFRRLRIDEVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQ
CKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGRNGAKT
ILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLM
TPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQAT
FYDDLQAAKTRGELSYDKSLVPVGSSEL
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaagactttttgtataacgccttatacttcatagaggattataagttggttgttatt
tttagtttcatagggttaatagcgttgtttttcctctacaaattcataaaaactcaaaaa
aaggtttttaaagataaagctaaccagcctcaaaagaaaaaaagctttaaagaaatcatt
atagatgggctgaaagaaagggttaaaacctttggcttttggttgcaagcgatactatta
ctatcctattcttttatcacatcagggttatttttcttgattctcttaggtaatttttat
gatgataataaattgcctgagagcgatgatgatctttttgatatatgggtctatgcgata
caagattttcctgcatactattttaaggcactcacttttagctcgctcaagatttatggg
ttcaatatatccttagtcgtatatagttctattttatgctcttatatattcattaccttt
tttgtgtggttcttaaaatacttaactcggactagagatataggagcgaataaaaaagtt
gatgatctctttggtagcgcgagttgggaaactgaagagaaaatgatcaaagccaagctt
atcacacccaacaataaaaaacgcgcctttgacaagcgagaggtgattgtaggcaggcga
ggtttgggggattttatcgcttacgcaggacaggcgttcattggactcattgcccctact
aggagcggtaagggggtgggtttcatcatgcccaatatgatcaattatcctcaaaatatc
gttgtgtttgatcctaaggctgacactatggaaacttgcgggaaaatcagagagaaacgc
ttcaaccaaaaagtgttcatctatgaacctttctccttaaaaacacaccgatttaatcct
ttcgcttatgtggattttggtaatgatgtggttttgactgaagacatactctctcaaatt
gacacacgcttaaaagggcatggcatggtggctagtggaggggatttttccactcaaatc
tttggattggctaagttggtgttccctgaaagacctaatgaaaaagatcctttctttagc
aatcaagcgcgaaacctctttgtcatcaattgcaatatttacagggatctcatgtggact
aaaaaggggcttgagtttgtcaaaagaaaaaaaatcatcatgcctgaaacccctacgatg
tttttcataggttctatggcaagcgggatcaacctgattgatgaagacacaaacatggaa
aaagtcgtgtctttaatggaattttttggaggtgaagaagataagagtggcgataatcta
agagcgcttagtcctgccactagaaacatgtggaataactttaagacaatgggtggtgct
agagaaacttatagctcggttcaaggggtatatacttcagcctttgctccttataataac
gcaatgatcaggaatttcacgagcgctaatgattttgattttaggcgtttaaggatcgat
gaggtcagcattggcgtgatcgctaatcctaaagaaagcactattgttggaccgatatta
gagctgtttttcaacgtgatgatttatagcaacctgattctgccaatccatgatccacaa
tgcaaaagaagctgcttgatgctcatggatgaattcactttgtgtggctatttagagacc
tttgttaaagcggtagggatcatggcagaatacaacatgcgccctgcttttgtgtttcaa
agtaaggcacaattagaaaatgatcccccacttggttatggtaggaatggcgctaagact
attttagacaacctttctttgaatatgtattatgggatcaacaacgataactactatgaa
cattttgaaaagctttctaaagtgttagggaaatacacaaggcaagatgtgagccgaagc
attgatgacaatacgggtaagaccaacacttctatcagcaacaaggagcggtttttgatg
acccctgatgaattgatgactatgggcgatgagcttatcattttagaaaatacgctcaaa
cccatcaaatgccacaaggcgctttactatgatgatcctttcttcaccgatgagctcatt
aaggtgagtccaagcttgagcaagaaatacaaattggggaaagtgcctaatcaagcaaca
ttttatgatgacttgcaagccgctaaaaccagaggcgaattgagctatgataaatcttta
gtgcctgtgggttcaagcgaactgtga

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