Helicobacter pylori Gambia94/24: HPGAM_03690
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Entry
HPGAM_03690 CDS
T01917
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg03030
DNA replication
heg03430
Mismatch repair
heg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPGAM_03690
03430 Mismatch repair
HPGAM_03690
03440 Homologous recombination
HPGAM_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heg03032
]
HPGAM_03690
03400 DNA repair and recombination proteins [BR:
heg03400
]
HPGAM_03690
Enzymes [BR:
heg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPGAM_03690
DNA replication proteins [BR:
heg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPGAM_03690
DNA repair and recombination proteins [BR:
heg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPGAM_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
EH_Signature
RCF1-5-like_lid
AAA_5
DNA_pol3_gamma3
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADU81565
LinkDB
All DBs
Position
complement(754629..756368)
Genome browser
AA seq
579 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCETGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETEGVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAIVELEQAPFNQSPSINY
NAPKQESKNIENIEKREKREKIESIEKRESTETPQTPMLSAKDRIFHNLFKQVQTLVYER
NYELGAVFEKNIRFIDFDSQTKTLTWESLAADKDKELLRERVKIVKSIVDGVFGKGESIK
IALKHHLENKSAPEETKEVKDFKISSLREKILPKPTTETTAEIQEKEIKEKEVQENETKE
TKETQPKEAPTALQEFMANHSELIEEIKSEFEIKSVELL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggccaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggtaaaaccagctcttctaggatttttgctagggcttta
atgtgcgaaacagggccaaaagctgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccacatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaacctcatagagcaaacgcgctacaaaccaagttttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccactgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaggtgagctatgaaagtagcgcg
ttagaaaaactcgctcacagcgggcaagggagtctaagggatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttagga
gcgattgataggagcgttttagaagattttttccaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgctattttagaaaattatgaaaccgagggcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcttattccattcttttgata
gagcgcttttttaaaatcattatgagcagtttgagccttttaaaagaaggggcaaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattgtagaattagagcaagcccctttcaatcaaagccctagcataaactat
aacgcccctaaacaagaatctaaaaatatagaaaatatagaaaaaagagaaaaaagagaa
aaaatagagagcatagaaaaaagagaaagcacagaaaccccacaaactcccatgctttca
gctaaagatcgcatttttcacaaccttttcaaacaagtccaaacattggtttatgagcgc
aactacgagttgggggcggtgtttgaaaaaaatatccgtttcattgattttgacagccag
actaaaaccttgacttgggagtctttagccgctgataaggataaagagcttttaagagag
cgtgttaaaatcgtgaaaagtatcgttgatggggtttttggcaagggcgaaagcatcaaa
atcgctttaaaacatcatttggaaaataaaagcgctccagaagaaactaaagaggttaaa
gattttaaaatctcttctttaagggaaaagatcttacccaaaccaaccaccgaaacgacg
gctgaaatacaagaaaaagaaattaaagaaaaagaggttcaagaaaacgaaactaaagag
actaaagaaacccaacccaaagaagccccaacagccttgcaagaatttatggctaaccac
tctgagctgattgaagaaattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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