Helicobacter pylori Gambia94/24: HPGAM_04550 Help Entry HPGAM_04550       CDS       T01917                                  Name (GenBank) vacuolating cytotoxin   KO K11028   vacuolating cytotoxin Organism heg  Helicobacter pylori Gambia94/24 Pathway heg03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:heg00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     HPGAM_04550  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:heg02000]     HPGAM_04550    02044 Secretion system [BR:heg02044]     HPGAM_04550    02042 Bacterial toxins [BR:heg02042]     HPGAM_04550 Transporters [BR:heg02000]  Other transporters   Pores ion channels [TC:1]    HPGAM_04550 Secretion system [BR:heg02044]  Type V secretion system   Autotransporter-1 (AT-1) family    HPGAM_04550 Bacterial toxins [BR:heg02042]  Type III toxins: Intracellular toxins   Others    Vacuolating cytotoxin     HPGAM_04550  Type II toxins: Membrane damaging toxins   Pore-forming toxins, Other    HPGAM_04550 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VacA Motif Other DBs NCBI-ProteinID:  ADU81729 LinkDB All DBs Position 920454..924320 Genome browser AA seq 1288 aa AA seqDB search MEIQQTHRKMNRPLVSLVLAGALISAIPQESHAAFFTTVIIPAIVGGIATGAAVGTVSGL LSWGLKQAEEANKTPDKPDKVWRIQAGRGFNNFPHKQYDLYQSLLSSKIDGGWDWGNAAR HYWVKGGQWNKLEVDMKDAVGTYKLSGLRNFTGGDLDVNMQKATLRLGQFNGNSFTSYKD SADRTTRVNFNAKNISIENFVEINNRVGSGAGRKASSTVLTLQASEGITSSKNAEISLYD GATLNLASNSVKLNGNVWMGRLQYVGAYLAPSYSTINTSKVQGEVDFNHLTVGDQNAAQA GIIASNKTHIGTLDLWQSAGLNIIAPPEGGYKDKPNNTPSQSGTKNDKQEISQNNNSNTE VINPPNNTQKTETEPTQVIDGPFAGGKDTVVNIDRINTKADGTIRVGGFKASLTTNAAHL NIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQVGGYALAGSSANFEFKAGVDTK NGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTGKVNINKLITASTN VAVKNFNINELVVKTNGISVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGVKFKGGEK LVIDEFYYSPWNYFDARNVKNVEITRKFASSTPENPWGTSKLMFNNLTLGQNAVMDYSQF SNLTIQGDFINNQGTINYLVRGGKVATLSVGNAAAMMFNNDIDSATGFYKPLIKINSAQD LIKNTEHVLLKAKIIGYGNVSTGTNSISNVNLEEQFKERLALYNNNNRMDTCVVRNENDI KACGMAIGNQSMVNNPENYKYLIGKAWRNIGISKTANGSKISVYYLGNSTPTENGGNTTN LPTNTTNNARSANYALVKNAPFAHSATPNLVAINQHDFGTIESVFELANRSKDIDTLYTH SGTKGRDLLQTLLIDSHDAGYARQMIDNTSTGEITKQLNAATDALNNVASLEHKQSGLQT LSLSNAMILNSRLVNLSRKHTNHIDSFAQRLQALKGQRFASLESAAEVLYQFAPKYEKPT NVWANAIGGASLNSGSNASLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFSNQANSLNSG ANNANFGVYSRFFANQHEFDFEAQGALGSDQSSLNFKSALLQDLNQSYNYLAYSATARAS YGYDFAFFRNALVLKPSVGVGYNHLGSTNFKSNSQSQVALKNGASSQHLFNANANVEARY YYGDTSYFYLHAGVLQEFAHFGSNDVASLNTFKINAARSPLSTYARAMMGGELRLAKEVF LNLGVVYLHNLISNASHFASNLGMRYSF NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt atggaaatacaacaaacacaccgcaaaatgaatcgccctttggtttctctcgttttagca ggagcgttgattagcgccataccgcaagagagtcatgccgcctttttcacgaccgtgatc attccagccattgttgggggtatcgccacaggcgctgctgtaggaacggtctcagggctt cttagttggggactcaaacaagccgaagaagcgaataaaaccccggacaaacccgataaa gtttggcgcattcaagcaggcagaggctttaataattttcctcacaagcaatacgactta taccaatcccttttatccagtaagattgatggaggttgggactgggggaacgccgctagg cattattgggtcaaaggcgggcaatggaataagcttgaagtggatatgaaagacgctgta gggacttataaactatcagggcttagaaactttactggtggggatttagacgtgaatatg caaaaagccactttacgcttgggccaattcaatggcaattctttcacaagctataaggat agcgccgatcgcaccacgagagtgaatttcaacgctaaaaatatctcaattgaaaatttt gtagaaatcaataatcgtgtgggttctggagccgggaggaaagccagctctacggttttg actttgcaagcttcagaagggatcactagcagtaaaaatgcggaaatttctctttatgat ggcgccacgctcaatttggcttcaaacagcgttaaattaaatggtaatgtgtggatgggc cgtttgcaatacgtgggagcgtatttggccccttcatacagcacgatcaacacttcaaaa gttcaaggggaagtggattttaaccatctcactgtgggggatcaaaacgccgctcaagcg ggcattatcgctagcaataagactcatattggcacactggatttgtggcaaagcgccggg ttaaacattatcgcccctccagaaggtggctacaaggataaacctaataataccccttct caaagtggcactaaaaacgacaagcaagagatcagtcaaaataacaatagcaacacagag gtcattaacccacccaataacacgcaaaaaacagaaactgaacccacgcaagtcattgat gggccttttgcgggtggcaaagacacggttgtcaatattgatcgcataaacactaaagcc gatggcacgattagagtgggagggtttaaagcttctcttaccaccaatgcggctcatttg aatatcggcaaaggcggtgtcaatctgtccaatcaagcgagcgggcgcacccttttagtg gaaaatctaaccgggaatatcaccgttgatgggcctttaagggtgaataatcaagtgggt ggctatgctttggcaggatcaagcgcgaattttgaatttaaagctggtgtggatactaaa aacggtacagccactttcaataacgatattagtttgggaagatttgtgaatttaaaggtg gatgctcatacagctaattttaaaggtattgatacgggtaatggtggtttcaacacctta gattttagtggtgttacaggtaaggtcaatatcaacaagctcattacggcttccactaat gtggccgttaaaaacttcaacattaatgaattggttgttaaaaccaatgggataagtgtg ggggaatacactcattttagcgaagatataggcagtcaatcgcgcatcaataccgtgcgt ttggaaactggcactaggtcaatcttttctgggggtgtcaaatttaaaggcggcgaaaaa ttggttatagatgagttttactatagcccttggaattattttgacgctaggaatgttaaa aatgttgaaatcaccagaaaattcgcttcttcaaccccagaaaacccttggggcacatca aagcttatgtttaataacctaaccctgggtcaaaatgcggtcatggactatagtcaattt tcaaatttaaccattcagggggattttatcaacaatcaaggcactatcaactatctggtc cgaggtgggaaagtggcaaccttaagcgtaggcaatgcagcagctatgatgtttaataat gatatagacagcgcgaccggattttacaaaccgctcatcaagattaacagcgctcaagat ctcattaaaaatacagagcatgttttattgaaagcgaaaatcattggttatggtaatgtt tctacaggtaccaatagcattagtaatgttaatctagaagagcaattcaaagagcgccta gccctttataacaacaataaccgcatggatacttgtgtggtgcggaatgaaaatgacatt aaagcatgcggtatggctatcggcaatcaaagcatggtgaacaaccctgaaaattacaag tatcttatcggtaaggcatggagaaatataggcatcagtaaaacggctaatggctctaaa atttcggtgtattatttaggcaattctacgcctactgagaatggtggcaataccaccaac ttacccaccaacaccactaataatgcgcgttctgctaactacgctctcgtgaagaacgct cctttcgctcacagcgccactcctaatttagtcgctatcaatcagcatgattttggcacc attgaaagcgtgtttgaattggctaaccgctctaaagatattgacacgctctatactcat tcaggcacaaaaggcagggatctcttacaaaccttattgattgatagccatgatgcgggt tatgccagacaaatgattgataacacaagcaccggtgaaatcaccaagcaattgaatgcg gccactgacgctttaaacaacgtagccagtttagagcataaacaaagcggcttacaaact ttgagcttgagcaatgcgatgattttaaattctcgtttagtcaatctctctaggaagcac accaaccatattgactcgttcgctcaacgcttacaagctttaaaaggccaaagattcgct tctttagagagcgcagcagaagtgttgtatcaatttgctcctaaatatgaaaaacccacc aacgtttgggctaacgctattgggggagcgagcttgaatagcggctctaacgcttcattg tatggcacaagcgccggcgtagacgcttaccttaacggggaagtggaagccattgtgggc gggtttggaagctatggttatagctcctttagcaatcaagcgaactctcttaactctggg gccaataacgctaattttggcgtgtatagccgtttttttgccaaccagcatgaatttgac tttgaagctcaaggggcgctagggagcgatcaatcaagcttgaatttcaaaagcgctcta ttacaagatttgaatcaaagctataattacttagcctatagcgccacagcaagagcgagc tatggttatgacttcgcgttttttaggaacgctttagtgttaaaaccaagcgtgggcgtg ggctataaccatttaggttcaaccaactttaaaagcaatagccaatcacaagtggcttta aaaaatggcgcgagcagtcaacatttattcaacgctaacgctaacgtggaagcgcgttat tattatggggacacttcatacttctatttgcatgcgggagttttacaagagttcgctcac tttggatcgaatgatgtggcgtctttaaacacctttaaaatcaatgccgctcgcagtcct ttaagcacctatgcaagagcgatgatgggtggggaattgcgattagctaaagaagtgttt ttgaatttgggcgtggtttatttgcacaatttgatttccaacgcaagccatttcgcttcc aatttaggaatgaggtatagtttctaa

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