Helicobacter pylori Gambia94/24: HPGAM_04950
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Entry
HPGAM_04950 CDS
T01917
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg00540
Lipopolysaccharide biosynthesis
heg01100
Metabolic pathways
Module
heg_M00866
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPGAM_04950
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
heg01005
]
HPGAM_04950
Enzymes [BR:
heg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPGAM_04950
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPGAM_04950
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HPGAM_04950
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HPGAM_04950
Lipopolysaccharide biosynthesis proteins [BR:
heg01005
]
Lipid A
HPGAM_04950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
DUF2443
Motif
Other DBs
NCBI-ProteinID:
ADU81804
LinkDB
All DBs
Position
complement(1003523..1004704)
Genome browser
AA seq
393 aa
AA seq
DB search
MFKFFYLLCLTLGHLFCAPFILLLSFKEKYRHSLKARFFLKGNLLKSEPVFWFHACSYGE
VKSLEPIIQALKEPILISVTTHTGFELAAQTYQHSKHIEVRYLPFETLLFAWEKNLKRLK
TLVVTEAELWFNAFDTAQKLGAKTILINARISVRSYPKYQRFSFFYAILFKRIDLILAQS
KDDQKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL
ELKKTFKNARLFVVPRHPERFKSVRNLLQDILKTTLFSLECFSSKGFVECDILLVDRLGE
LNNFYAIADIVILGGSFVKMGGHNPLEPAFFNTRLITGEHLFNQVALFELVKPYKIVPKE
DLLDALLDYKNLGVARFLENGHDLNELLAFIKH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaagtttttctaccttttatgtttgactttggggcatcttttttgtgcgcctttc
atcttgcttttgagttttaaagaaaaataccgccactctttaaaggctcgtttttttctc
aaaggcaatcttttaaaaagcgagccggttttttggttccatgcatgctcttatggggag
gtcaaatccttagagccgatcattcaagctttaaaagagccgattttaatcagcgttacc
acccataccggctttgaattagccgctcaaacttaccagcactctaagcatatagaagtg
cgttacctgccttttgaaaccctattatttgcatgggaaaaaaacttaaaacgcttgaaa
actttggtggttacagaagcggaattgtggtttaacgcgtttgatacggctcaaaaatta
ggggcaaaaaccatactcattaacgctcgcatcagcgttcgctcttaccccaagtatcag
cgtttttctttcttttatgcgattttattcaaacgcattgatttgattttggcgcaaagt
aaggacgatcaaaaacgcttgttgaatctaggggccaaaaaagtggtggattttttgaat
atcaagcgtttttcaaagcctgtgatcacttcgttttaccctaaaaacccaagcgcttta
aacattgttttagccagcacgcatgagggcgaagaggaattagggttaaaagcgttttta
gaattgaaaaagacttttaaaaacgcaagactttttgttgtgccgcgccaccccgagcgt
tttaaaagcgtgcggaatttgttgcaagatattttaaaaacgacgctttttagtttggag
tgtttttcttcaaagggttttgtggaatgcgatattttgttagtggataggttgggggaa
ttgaataacttttatgcgatcgctgatattgtcattttagggggttcgtttgtcaaaatg
ggggggcataaccctttggagccggcgttttttaatacgcgcctaatcacaggggagcat
cttttcaaccaggtggcgttgtttgaattagtcaagccttataaaatcgttccaaaagag
gatttgttagacgctcttttagattacaaaaatttgggcgtggcgcgttttttagaaaac
gggcatgatttaaacgaattgctcgcattcattaaacattaa
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