Helicobacter pylori Gambia94/24: HPGAM_05105
Help
Entry
HPGAM_05105 CDS
T01917
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
heg
Helicobacter pylori Gambia94/24
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heg03032
]
HPGAM_05105
03400 DNA repair and recombination proteins [BR:
heg03400
]
HPGAM_05105
Enzymes [BR:
heg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPGAM_05105
DNA replication proteins [BR:
heg03032
]
Prokaryotic type
DNA Topoisomerases
HPGAM_05105
DNA repair and recombination proteins [BR:
heg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPGAM_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
HAT1_C_fung
DUF6293_C
Motif
Other DBs
NCBI-ProteinID:
ADU81828
LinkDB
All DBs
Position
1036470..1038065
Genome browser
AA seq
531 aa
AA seq
DB search
MYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTDKKK
DRSTHINYMINQRKDKVVYIATDPDREGYGIGYKFYEKIKNLAKTIYRTEFHEITKSGVE
KGLNNAMLFSQSNLNLYYSWLGRIVSDQFIGFTLTPYLRKNIKNFEVSAGRVQTPALSIL
VELDKKIQAFEQKSIDEKLSYSIEAIIDALGSQISITLVEEDKRKVFETKELAQNFLNDL
KNNLNPLAFLDSIEQKDKEKAPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAGLIT
YIRTDSESLSKEYLQEHEAFFESIYPSVYEYREYKAGKNSQAEAHEAIRITRPHCYEDLK
KVCEEHNITDIDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHSFKCSFSQLKSKGF
KAIKDSEEEKDEEWVESDIDFSSLQLKTQMPILDFNIKEIKAKSPSPYTESTFIAMMETY
GIRRPSTYTSVFETLKNKNYITLEGKNRKITPTALGKSIVNFFLNDSQTQR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactgcgtatttatcatagaaagtcctaataaaatcgctaaaatcaaagaa
ttaacaggaagttcatttgtttttgcaactggtgggcattttgttgagttagtcaatatt
gaagtgagtaaagaatttaaccctatttttgaaatcaaaaaaagcacggataagaaaaaa
gatagatccactcatatcaattacatgatcaatcaacgtaaagacaaagtagtctatatt
gctactgaccctgatagagaaggttatggcataggttataaattttatgaaaaaatcaaa
aatctggctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagcggtgtggaa
aaaggcttgaataatgctatgctattttctcaaagcaatctcaatctctattatagctgg
ctaggtaggattgtaagcgatcaatttataggttttactttaacgccttatttgcgcaaa
aacattaagaattttgaagtgagtgctggtagggttcaaacccctgctctttccatttta
gtagaattagacaaaaaaatccaagcctttgaacaaaaaagcattgatgagaaattaagt
tatagcatagaagctattattgatgcgctaggttctcaaatctctattactttagtagaa
gaggataaaaggaaagtgtttgagaccaaagaattagcccaaaattttttaaatgactta
aaaaacaatcttaacccattagcttttttagactcaatagagcaaaaagataaagagaaa
gctccacctaaacctttcaccacttctaatcttttaaaagatggggttagaattttagaa
atgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggattgattact
tatattcgcaccgacagcgaatcattaagcaaagaatacttgcaagagcatgaagcgttt
tttgaaagtatttatcctagcgtgtatgaatacagagaatataaggctggtaaaaattcg
caagctgaagcgcatgaggctataagaattacacgccctcactgctatgaagatcttaaa
aaagtgtgtgaggaacacaatattacagatattgatgatttaaaagtttatacgcttatc
ttttttaacaccatttgttctcaaagtaaaaacgctatttatgaaaacacaactttaaac
tttaaggtaaaaacgcacagctttaaatgcagttttagccaactcaaatctaaaggtttt
aaagcgattaaagattcagaagaagagaaagatgaagaatgggttgaaagcgatattgat
ttttcaagcttgcaattaaaaactcaaatgcctattttagatttcaatatcaaagaaata
aaagctaaatcccctagcccttatactgaaagcacttttattgcaatgatggaaacctat
ggcataagaagacctagcacttatacgagtgtatttgagaccttaaaaaacaaaaattac
atcacattagagggtaaaaatagaaagatcacacccacagctttgggtaaaagcatcgtt
aatttcttcttaaatgatagccaaacgcagcgatga
DBGET
integrated database retrieval system
