Helicobacter pylori Gambia94/24: HPGAM_05420
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Entry
HPGAM_05420 CDS
T01917
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPGAM_05420 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
heg03011
]
HPGAM_05420 (rpsA)
Ribosome [BR:
heg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPGAM_05420 (rpsA)
Bacteria
HPGAM_05420 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
RuvA_N
CBFD_NFYB_HMF
GspL_C
Chordopox_A30L
Motif
Other DBs
NCBI-ProteinID:
ADU81875
LinkDB
All DBs
Position
1103042..1104700
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIADDQYFNDEEEDFAKLLEKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLA
LNEITDEKGQLMYQKNDPIVVHVSEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIE
GKIVGKNKGGYIVESQGVEYFLSRSHSSLKNDANHIGKRIKACIIRVDKENHSINISRKR
FFEVNDKRQLEVSKELLEATEPVLGVVRQITPFGIFVEAKGIEGLVHYSEISHKGPVNPE
KYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGV
FVDIGNDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDIVEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFIHADGID
VLIKNEDLSPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatagcagacgatcagtattttaatgacgaggaggaagacttcgcaaaactc
ttagaaaaagaagaaactctagaaaaaggcactatcaaagaagggttaatcgtttccatc
aatgagaatgatgggtatgccatggtgagcgtgggcggtaagacagaaggccgtttggct
ttgaatgagatcaccgatgaaaaggggcaattgatgtatcaaaaaaatgaccccattgtc
gtgcatgtgtccgaaaaaggcgaacaccctagcgtttcctacaaaaaggccatttcccaa
caaaagattcaggctaaaattgaagaattgggcgaaaactatgaaaacgccattattgag
ggcaagatcgtaggcaagaataaaggaggctatatcgtggagtctcaaggcgtggagtat
ttcctctcccgctcgcactcttctttaaagaatgacgcaaaccatatcggcaaacgcatt
aaagcgtgtatcattcgtgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaggtttctaaagaattgttagaagccaca
gagccggtgttaggggttgtgcgccagatcaccccttttggtatttttgtagaagctaag
gggattgagggcttggtccattattctgaaatcagccataaagggccagtcaaccctgag
aaatactacaaagagggcgatgaagtctatgtcaaagctatcgcttatgatgaagaaaaa
agacgcctttcactctctataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaacattatggggtg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagccattacttgagcgtggggcaagaaattgatgtgaagatc
attgacattgatcctaaaaaccgccgcttaagggtttctttaaaacaactcactaacagg
ccttttgatgtttttgaatccaaacaccaagtgggggatattgtagagggcaaagtggcg
actttaacggattttggagcgtttttgaatctgggtggggtggatggtttgctccacaat
catgacgctttttgggataaagataaaaagtgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaataaaaaagataaaaagatttctttgagcgcgaag
cacttggtgacttcccctacagaagaattcgctcaaaagcataaaacagacagcgtgatt
caaggcaaagtggtgagtatcaaggattttggcgttttcattcatgctgatggcattgat
gtgctgatcaaaaatgaagatttaagccccttgaaaaaagatgaaatcaaaatagggcag
gaaatcacatgcgtggttgttgcgattgaaaagtctaacaacaaagtgcgcgcttctgtg
cataggttagagcgtaaaaaagaaaaagaagaattgcaagcctttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaagctctaa
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