Helicobacter pylori Gambia94/24: HPGAM_06965
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Entry
HPGAM_06965 CDS
T01917
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPGAM_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heg03400
]
HPGAM_06965
Enzymes [BR:
heg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPGAM_06965
DNA repair and recombination proteins [BR:
heg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPGAM_06965
Prokaryotic type
HPGAM_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADU82176
LinkDB
All DBs
Position
complement(1397521..1398222)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCALNLTPPS
AVKIILLGQDPYHSTYLDNEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDRILMRLFETISPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaaaccttattttttagagatagaaaaacgctacttagaagccctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttgcgcgctcaatctaacgccccctagc
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagacaatgaa
caagaattgccggtggcgatgggcttgagctttagcgtggaaaaaaacgcccccattccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttgggcgtgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctcttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaatatattggctgggaagcttttagcgatagg
atactgatgcgtctttttgaaacgatctcccctttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccctaaaaacaaacacatcatcatcacagcccctcac
cctagtccgttatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
tatagagaggtttatcataaggattttgattttagtttgtga
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