Helicobacter pylori Gambia94/24: HPGAM_08175
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Entry
HPGAM_08175 CDS
T01917
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg03030
DNA replication
heg03430
Mismatch repair
heg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPGAM_08175
03430 Mismatch repair
HPGAM_08175
03440 Homologous recombination
HPGAM_08175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heg03032
]
HPGAM_08175
03400 DNA repair and recombination proteins [BR:
heg03400
]
HPGAM_08175
Enzymes [BR:
heg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPGAM_08175
DNA replication proteins [BR:
heg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPGAM_08175
DNA repair and recombination proteins [BR:
heg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPGAM_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADU82401
LinkDB
All DBs
Position
complement(1652686..1653549)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKCQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVRGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPKARYQEIPSPFSLFERTKGLLNMVKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagtgccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcatagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaactccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccctaaaacatgagattttagaaatcggggctgtgcaagtgaggggg
ggggaaattatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggaatcacctatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtggcccacaacgctaatttt
gattacaactttttagggcgttattttgtggaaaaattgcattgccctttattgaattta
aagctttgcactttggatttatccaaacgcgccattttgtccatgcgttattctttgagt
tttttaaaagagcttttagggtttggcatagaagtcagccatagagcctatgcggatgct
ttagcgagctacaagctctttgaaatatgcttattaaacttgcctagttacatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacactttgatcaaaagacccccaaaa
gctagataccaagagatcccatcgccattttctctttttgagaggacaaagggtttgtta
aatatggtaaaagcaaccagttaa
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