KEGG   Helicobacter pylori Gambia94/24: HPGAM_08370
Entry
HPGAM_08370       CDS       T01917                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
heg  Helicobacter pylori Gambia94/24
Pathway
heg00550  Peptidoglycan biosynthesis
heg01100  Metabolic pathways
heg01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:heg00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPGAM_08370
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    HPGAM_08370
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:heg01011]
    HPGAM_08370
Enzymes [BR:heg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HPGAM_08370
Peptidoglycan biosynthesis and degradation proteins [BR:heg01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   HPGAM_08370
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: ADU82438
LinkDB
Position
complement(1689383..1691149)
AA seq 588 aa
MKSLRYKLLLFVFIGVWGLLILNLFILSVKNQEYYEKLAERNMTKKEFLIPTRGNITDRN
HEFLAINELVFGVFLPSRLKQKELLEKIEVIQKFFPNFSKETLLNNYQKENSLYNHNLIK
VVGFIPYATMQSLYTKLIQTQGIFVRPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMHVNALNQELATLEVVPPSANNHLQLSLDKRLQ
KEADKLFENKRGAILVMNAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLHITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAIHNQQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYL
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaaaagtcttcgctataagcttttgctctttgtttttataggggtttgggggttatta
atcttaaatctgtttattctaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgcaacatgactaaaaaagaatttctaatccctacaaggggcaatattacagacagaaac
catgagtttttagccattaatgaattggtgtttggcgtgtttttgcccagcagattgaaa
caaaaagagcttttagaaaaaattgaggtgatccaaaagtttttccctaatttttccaaa
gaaacgcttttgaataattaccaaaaagaaaattcgctctataaccataacctcattaaa
gtggtgggcttcattccctatgccaccatgcaatccctttataccaaactcatccaaact
caaggcatttttgtgcgccctttagacaagcgttactaccctaataacgctttagcttcg
catgttttaggttatgtgggggtggcaagtttgcaagatttaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagcttttacaa
ggcaaggtgggctataaaatcatgcatgtcaatgcactcaatcaagaattagccacctta
gaagtcgtgccaccaagcgccaataaccacctgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggctattttagtgatgaacgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtgggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccttattaaac
cgcttcgctaacgctttgtatccgccgggatctgtggttaaaatgggcgtgggcttaagc
tttttagaaaatcttcatatcacagaaaacaccaccatacccacaccgccttttattgaa
gtgggtaagcgcaaattcagggactggaaaaaaacagggcatggcaattccaatttgtat
aaagcgattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaagctcaaacgcttcaatcaa
gactggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttagccacc
cccttacaagtgctagcctacacgggcctcattgcgacaggcaaactggcgacgcctcat
tttgctatccataaccaacagccactcaaagatcccctgaatagctttcaaaaaaagaaa
ctccaagccttgagagtgggcatgtatgaagtgtgcaaccataaagacggcacggcttat
cattccacaagaggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagtcgta
gaaatcgctcaaaacatcgtcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattacggcattcttgccctatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactgggggggttgttagtgaaaatgagcaac
aaactctatgagcttggctatctttaa

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