Helicobacter pylori Gambia94/24: HPGAM_08370
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Entry
HPGAM_08370 CDS
T01917
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
heg
Helicobacter pylori Gambia94/24
Pathway
heg00550
Peptidoglycan biosynthesis
heg01100
Metabolic pathways
heg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
heg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPGAM_08370
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPGAM_08370
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
heg01011
]
HPGAM_08370
Enzymes [BR:
heg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPGAM_08370
Peptidoglycan biosynthesis and degradation proteins [BR:
heg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPGAM_08370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ADU82438
LinkDB
All DBs
Position
complement(1689383..1691149)
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AA seq
588 aa
AA seq
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MKSLRYKLLLFVFIGVWGLLILNLFILSVKNQEYYEKLAERNMTKKEFLIPTRGNITDRN
HEFLAINELVFGVFLPSRLKQKELLEKIEVIQKFFPNFSKETLLNNYQKENSLYNHNLIK
VVGFIPYATMQSLYTKLIQTQGIFVRPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMHVNALNQELATLEVVPPSANNHLQLSLDKRLQ
KEADKLFENKRGAILVMNAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLHITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAIHNQQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtcttcgctataagcttttgctctttgtttttataggggtttgggggttatta
atcttaaatctgtttattctaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgcaacatgactaaaaaagaatttctaatccctacaaggggcaatattacagacagaaac
catgagtttttagccattaatgaattggtgtttggcgtgtttttgcccagcagattgaaa
caaaaagagcttttagaaaaaattgaggtgatccaaaagtttttccctaatttttccaaa
gaaacgcttttgaataattaccaaaaagaaaattcgctctataaccataacctcattaaa
gtggtgggcttcattccctatgccaccatgcaatccctttataccaaactcatccaaact
caaggcatttttgtgcgccctttagacaagcgttactaccctaataacgctttagcttcg
catgttttaggttatgtgggggtggcaagtttgcaagatttaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagcttttacaa
ggcaaggtgggctataaaatcatgcatgtcaatgcactcaatcaagaattagccacctta
gaagtcgtgccaccaagcgccaataaccacctgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggctattttagtgatgaacgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtgggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccttattaaac
cgcttcgctaacgctttgtatccgccgggatctgtggttaaaatgggcgtgggcttaagc
tttttagaaaatcttcatatcacagaaaacaccaccatacccacaccgccttttattgaa
gtgggtaagcgcaaattcagggactggaaaaaaacagggcatggcaattccaatttgtat
aaagcgattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaagctcaaacgcttcaatcaa
gactggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttagccacc
cccttacaagtgctagcctacacgggcctcattgcgacaggcaaactggcgacgcctcat
tttgctatccataaccaacagccactcaaagatcccctgaatagctttcaaaaaaagaaa
ctccaagccttgagagtgggcatgtatgaagtgtgcaaccataaagacggcacggcttat
cattccacaagaggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagtcgta
gaaatcgctcaaaacatcgtcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattacggcattcttgccctatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactgggggggttgttagtgaaaatgagcaac
aaactctatgagcttggctatctttaa
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