Herbiconiux sp. L3-i23: L3i23_00070
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Entry
L3i23_00070 CDS
T08550
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_00070 (gyrA)
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_00070 (gyrA)
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L3i23_00070 (gyrA)
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Topoisomerases
L3i23_00070 (gyrA)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3i23_00070 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDI21231
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Position
7920..10445
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AA seq
841 aa
AA seq
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MTDKIEQVDLQLEMQRSYLDYAMSVIVGRALPDVRDGLKPVHRRVVYAMFDGGYRPDRAF
SKCARVVGEVMGQYHPHGDSAIYDALVRLVQPWSLRYPLALGQGNFGSPGNDGAAASRYT
ETKMAPLAMEMVRDIDKETVDFQDNYDGRTQEPVVLPSRFPNLLVNGSVGIAVGMATNIP
PHNLREVADGALWALANPEATREELLAALMQRIKGPDFPTGAQILGTKGIQDAYLTGRGS
ITMRAVVNVEEIQGRTCLVVTELPYQVNPDNLAVKIAELVKDNRIAGISDIRDESSGRTG
QRLVVVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGVPRTLPIDGFISAWVDHQID
VIVRRTEYLLREAEEQAHILRGYLKALDALDEVIALIRRSPTADAAQTGLMELLDVDEIQ
ADAILRLQLRRLAALERQKIVDQAAEIELQIADYKDILASPSRQRTIISDELTEIVDRFG
DERRTEILLGYDGDMSIEDLIPEEEMVVTVTRGGYIKRTRSDNYRSQHRGGRGVRGAQLR
ADDVVEHFFVTTTHHWLLFFTDKGRVYRAKAYEVQEGGRDAKGQHVANLLALQPDEQIAE
VLDIRDYNVSQYLVLATRNGLVKKTALTEYDTNRTGGIIAINLREGDELVSALLVNSDTD
VLMVSKKGMSIRFTATDEALRPMGRSTSGVMGMSFRDEDQLLSASVVGGDEAENYVFIVT
EGGYAKRTSVDQYRVQNRGGLGIKVAKLEEARGDLAGALIVTEGDEVLVVLAGGKVVRSG
VSEVPAKGRDTMGVVFARFSAQDRIIAVAKNSERNVEGNAEGDTPEGEAVEAPGEGENAD
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagatcgagcaggtagaccttcagctcgagatgcagaggtcgtacctcgac
tacgcgatgagcgtgatcgtgggacgcgccctccccgacgtacgcgacgggctgaagccg
gtgcaccgccgggtcgtctacgcgatgttcgacggcggctaccgccccgaccgggcgttc
agcaagtgcgcccgcgtggtcggcgaggtcatggggcagtaccacccgcacggtgacagc
gcgatctacgacgccctcgtccgactcgtgcagccgtggagcctgcggtatccgctcgct
ctcggccagggcaacttcggctctccgggcaacgacggcgccgcggcgtcgcggtacacc
gagacgaagatggccccgctcgccatggagatggtgcgcgacatcgacaaggagaccgtc
gacttccaggacaactacgacgggcgcacccaggagcccgtcgtcctgccgagtcggttc
ccgaacctgctggtcaacggatcggtcggtatcgccgtcggcatggccaccaacatcccg
ccgcacaacctgcgcgaggtcgccgacggcgccctgtgggcactcgcgaaccccgaagcc
acccgcgaggagctgctcgccgcgctgatgcagcgcatcaagggacccgacttcccgacc
ggcgcgcagatcctcggcaccaagggcatccaggacgcgtacctcaccggtcgcggatcg
atcacgatgcgcgccgtcgtcaacgtcgaggagatccagggacgcacctgcctcgtcgtc
accgaactgccctaccaggtcaaccccgacaacctcgcggtgaagatcgccgagctggtc
aaggacaaccgcatcgccggcatctccgacatccgcgacgagagctcgggccgcaccggt
cagcgcctcgtcgtcgtgctgaagcgcgatgcggtcgcgaaggtcgtcctcaacaacctg
tacaagcacacgcagctgcaggagaacttcggcgccaacatgctggcgatcgtcgacggg
gtgcctcgcaccctgccgatcgacggcttcatctcggcgtgggtcgaccaccagatcgat
gtcatcgtccgtcgcaccgagtacctgctgcgtgaggccgaggagcaggcgcacatcctc
cgcggttatctcaaggcgctcgacgcgctcgacgaggtcatcgctctcatccgccggtct
ccgaccgccgacgccgcgcagaccggcctcatggagttgctcgacgtcgacgagatccag
gccgacgcgatcctgcgcctgcagctgcgccgcctcgccgcgctcgagcggcagaagatc
gtcgatcaggcggccgagatcgagctgcagatcgcggactacaaggacatcctcgcgagc
ccgtcgcgtcagcgcacgatcatcagcgacgagctgaccgagatcgtcgaccgcttcggc
gacgagcgtcggaccgagatcctgctcggctacgacggcgacatgagcatcgaggatctg
atccccgaagaggagatggtcgtcaccgtcacgcgcggcgggtacatcaagcgcacgcgc
agcgacaactaccgcagccagcaccgcggcggccgcggcgtgcgaggtgcgcagctgcgc
gccgacgacgtcgtcgagcacttcttcgtcaccaccacccaccactggctgctgttcttc
accgacaagggccgggtctaccgggcgaaggcctacgaggttcaggagggcggccgcgac
gcgaagggtcagcacgtcgccaacctgctggcgctgcagcccgatgagcagatcgcggaa
gtgctcgacatccgcgactacaacgtctcgcagtacctggtgctcgccacccgcaacggt
ctcgtcaagaagacggcgctcaccgaatacgacacgaaccgcaccggtggcatcatcgcg
atcaacctgcgcgagggcgacgagctcgtctcggcgctgctcgtgaactccgacaccgac
gtgctgatggtgtcgaagaagggcatgtcgatccggttcaccgcgaccgacgaggccttg
cgcccgatgggccgcagcacgtccggcgtgatgggcatgagtttccgcgacgaggatcaa
cttctgtcggcgtcggtcgtcggcggcgacgaggctgagaactacgtgttcatcgtcacc
gagggcggctacgcgaagcgcacttcggtagaccagtaccgtgtgcagaaccgtggcgga
ctcggcatcaaggtcgcgaagctcgaagaggctcgcggcgacctggccggtgcgctcatc
gtcaccgagggcgacgaggttctcgtcgttctggcaggcggaaaggtggttcgttcgggt
gtctccgaggtcccggccaagggacgtgacaccatgggtgttgtcttcgctcgcttcagt
gcgcaggacaggatcatcgctgtcgccaagaacagcgaacgcaacgtggaaggcaacgcc
gagggtgacacccccgagggcgaagcagtagaggctccgggagagggagagaacgccgat
gagtag
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