Herbiconiux sp. L3-i23: L3i23_02860
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Entry
L3i23_02860 CDS
T08550
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03030
DNA replication
heh03430
Mismatch repair
heh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3i23_02860
03430 Mismatch repair
L3i23_02860
03440 Homologous recombination
L3i23_02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_02860
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_02860
Enzymes [BR:
heh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3i23_02860
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3i23_02860
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3i23_02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
AAA_30
RuvB_N
DnaX_C
AAA_19
Rad17
AAA_14
AAA_16
nSTAND3
T2SSE
AAA_2
AAA_18
AAA_28
DUF6325
Motif
Other DBs
NCBI-ProteinID:
BDI21510
LinkDB
All DBs
Position
289203..291227
Genome browser
AA seq
674 aa
AA seq
DB search
MVTALYRRYRPESFGELIGQAQVTDPLRTALRTDRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGTCDSCVELGRGGGGSLDVVEIDAASHNGVDDARDLRERAVFAPARDR
YKIFILDEAHMVTPQGFNALLKIVEEPPEHVMFIFATTEPEKVIGTIRSRTHHYPFRLVP
PAQMLEYLGQLCAAEQVAVEPGVLPLVVRAGGGSVRDTLSLLDQLIAGSEGSTVGYERAV
ALLGYTHGALLDEIVLALGQRDAAAAFGAVDRVVQTGQDPRRFVEDLLERLRDLIVVGAT
GAGAGSVLRGVPDEQIENYRVQATHFGAAELSRAADVVNDALTEMTGATSPRLHLELMIA
RTLVPASDASGALARVERLERRVGVENAPDPAPASASRAPAAAAIASAAPPAGRQAPPLE
QQAHARTPQAAPAAPPAPAAPAVSATPSSPPAARQNAPVSEPGWEVRVPGAPAADPDWEV
RIPGGAAPAAPAEPQPEPEPSQPTPAREPEAIAPTAKEPASAPPEPIRAEPESAPAADPA
PLALEQIRDAWPEIIDVVKRSSMNAWTVVFTAQPLILNGDVLTLGFVSEADVTKFRQQQN
SGQGISEVLRTAILEVLGTRVKFLVRVDAPAPAPEPVHDPAAADESRRYGEAVVREILGA
NFIEETPLPPKTRD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaccgctctctaccgccgctaccggcccgagtccttcggcgaactcatcgggcag
gcccaggtgaccgatccgctgcgcaccgcgctgcgcaccgaccgggtcaaccacgcctac
ctgttcagcgggccccgcggctgcggcaagaccacatccgcccgcatcctcgcccgctgc
ctgaactgcgccgagggtcccaccgacactccgtgcggcacctgcgacagctgcgtcgag
ctcggtcgtggcggaggcggatcgctcgacgtcgtcgagatcgacgcggcgagccacaac
ggcgtcgacgacgcccgtgacctgcgcgagcgcgccgtgttcgctccggctcgcgaccgc
tacaagatcttcatcctcgacgaggcgcacatggtcacccctcaggggttcaacgcgctg
ctcaagatcgtcgaagaaccgcccgagcacgtcatgttcatcttcgcgacgaccgagccc
gagaaggtcatcggcaccatccggtcgcgcacccaccactacccgttccggctcgtgccg
cccgcgcagatgctcgagtacctgggccagctctgcgccgccgagcaggtcgccgtcgag
cccggcgtgcttccgctcgtcgtccgggcgggaggcggatccgttcgcgacaccctctcc
ctcctcgatcagctcatcgcgggatccgagggcagcacggtcggctacgagcgggccgtc
gccctgctgggctacacccatggcgcccttctcgacgagatcgtcctcgcactcggccag
cgcgacgccgccgccgccttcggggccgtcgaccgcgtcgtccagaccggccaggacccc
cggcgcttcgtcgaggacctcctcgagcggctccgcgacctcatcgtcgtcggcgcgacc
ggcgccggcgccgggtcggtgctgcgtggtgtccccgacgagcagatcgagaactaccgg
gtgcaggccacccacttcggcgccgccgagctctcgcgcgccgccgatgtcgtcaacgac
gccctgaccgagatgaccggggcgacctcaccccgtctccacctcgagctgatgatcgcc
cgcaccctcgtccccgcatccgacgccagcggggcactcgcccgagtcgagcggctcgag
cgccgtgtcggggtcgagaacgcgcccgaccccgctcccgcctccgcgtcgcgtgcgcct
gccgcagccgccattgcgtcggcggcgcctccggccgggcgccaggcgcctcctctggag
cagcaggctcacgcccgtacgccgcaggccgctcccgcggcgccgcccgcgcccgccgct
ccggcggtgtccgcaacgccctcgtccccgccggccgcgcggcagaacgccccggtgtcc
gagccgggatgggaggtccgggttcccggcgcccctgccgccgaccccgactgggaggtc
cgcatcccgggcggcgcggcaccggccgcccccgccgagccccagcccgagcccgagccg
tcgcagccgactcccgcgcgcgaacccgaagcgatcgcccccacggcgaaggaacccgcg
tccgcgccgcctgagcccatccgtgcggagccggagtccgctcccgcggccgaccccgcg
ccgctcgcgctcgagcagatccgtgacgcctggcccgagatcattgacgtcgtgaagcgc
agcagcatgaacgcgtggaccgtggtgttcacggctcagccgctcatcctcaacggcgac
gtcctcaccctcggcttcgtcagcgaggccgacgtcaccaagttccgtcagcagcagaac
tcgggacagggcatcagcgaggtgctgcgcacggcgatcctcgaggtgctcggcacgcgg
gtgaagttcctcgtgcgcgtcgacgcgcccgccccggcgccggaacccgttcacgacccg
gccgccgccgacgagtcgcgccggtacggcgaggcggtggtgcgcgagatcctcggcgcc
aacttcatcgaggagacgcccctgcctccgaagaccagggactga
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