Herbiconiux sp. L3-i23: L3i23_03090
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Entry
L3i23_03090 CDS
T08550
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03030
DNA replication
heh03430
Mismatch repair
heh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3i23_03090
03430 Mismatch repair
L3i23_03090
03440 Homologous recombination
L3i23_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_03090
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_03090
Enzymes [BR:
heh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3i23_03090
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3i23_03090
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3i23_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
RuvB_N
AAA_16
AAA_5
nSTAND3
AAA_11
AAA_29
Mg_chelatase
SLFN-g3_helicase
RNA_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BDI21533
LinkDB
All DBs
Position
315115..316278
Genome browser
AA seq
387 aa
AA seq
DB search
MSGMWDDLVGQSAAIETMRQAATAAHDRTSAPGAMTHSWLITGPPGSGRSNLAYAFAAAL
LGDGPDSDPATIRQVVARTHPDLAVLSTEKVIISIDEVRTLVTSSQYSPSVSNYRVMVIE
DADRMTERTSNLLLKALEEPPPRTVWILCAPSDADLLPTIRSRVRTVRLRIPEAEDVADL
LVARDGVERGVALAAAREAQSHIGMARRLAKNPDARERRAETLRLALGLRSVPSAVEAAA
RLVELAKADAESTSAERDAAEREQLLRTLGIEPGGTIPPALRSQVKALEDDQKRRSTRSL
RDGIDRILLDYLSLYRDILLRQLGAEVPLMNSSVSTELEAAALAGTAAHTLEVMDAVAAA
RRRIEANVPPALALEAMLVSAARKGAA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggatgtgggacgacctcgtggggcagtccgcggcgatcgagacgatgcgccag
gcggcgacggcggcgcacgaccgaacctccgcgcccggcgcgatgacgcactcgtggctg
atcaccgggccgcccggatccggccgctcgaacctcgcctacgcgttcgccgccgcactg
ctgggcgatggtccggactccgaccccgcgacgatccggcaggtcgtcgcccgcacgcat
cccgacctcgccgtgctcagcaccgagaaggtcatcatctccatcgacgaggtgcgcacc
ctcgtcacctcatcgcagtactcgccgtcggtgtcgaactaccgggtcatggtcatcgag
gacgccgaccgcatgaccgagcgcacctcgaacctgctgctcaaagcgctcgaagagccg
ccgccccgcacggtatggatcctctgcgcgccgagcgacgccgatctgctgcccacgatc
cgatcgcgagtgcgcaccgtgcggctgcgcatccccgaagcggaggacgtggccgacctc
ctcgtggcccgcgacggcgtcgagcgcggcgtggccttggcggccgcccgtgaggcgcag
agtcacatcggcatggcgcgccgcctcgcgaagaaccccgacgcacgggagcgccgcgcc
gaaactctgcgactggccctcggcctgcgatccgttccgtcggccgtcgaggcggcggcg
cgactcgtcgagctggcgaaggcggatgccgaatcgacatccgcagagcgcgacgccgcc
gagcgcgagcagctgctccgcacgctcggcatcgagcccgggggcacgatcccgcccgcg
ctgcgttcgcaggtgaaggcgctcgaagacgaccagaagcgtcgatcgacccgcagcctc
cgcgacggcatcgaccgaatcctcctcgactacctgtcgctctaccgggacatcctgctg
cgacagctgggcgccgaggtgccgctgatgaactcgtccgtgagcaccgaactcgaggcg
gcggcactcgccggcaccgcggcgcacaccctcgaggtgatggacgccgtcgcggcggcc
cgccgccgcatcgaggcgaacgtcccgcccgctctcgcgctcgaggcgatgctggtgagc
gcggcgcgcaagggggcggcatga
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