Herbiconiux sp. L3-i23: L3i23_03440
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Entry
L3i23_03440 CDS
T08550
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh00020
Citrate cycle (TCA cycle)
heh00190
Oxidative phosphorylation
heh00650
Butanoate metabolism
heh00720
Other carbon fixation pathways
heh01100
Metabolic pathways
heh01110
Biosynthesis of secondary metabolites
heh01120
Microbial metabolism in diverse environments
heh01200
Carbon metabolism
Module
heh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
heh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
heh_M00149
Succinate dehydrogenase, prokaryotes
heh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L3i23_03440 (sdhA)
00650 Butanoate metabolism
L3i23_03440 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
L3i23_03440 (sdhA)
00720 Other carbon fixation pathways
L3i23_03440 (sdhA)
Enzymes [BR:
heh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L3i23_03440 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
HI0933_like
DAO
Glyco_hydro_67N
Motif
Other DBs
NCBI-ProteinID:
BDI21568
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Position
complement(352382..354292)
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AA seq
636 aa
AA seq
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MSAAKRTGLFPKLVSDRGAQPGEAERNAESTSSWATQGTGETTDGVHHHQFDVVIVGAGG
AGMRAAIEAGPKAKTAVISKLYPTRSHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDY
LVDQDAAEILAKEAIDAVIDLENMGLPFNRTPDGKIDQRRFGGHTSEHGKAPVRRACYAA
DRTGHMILQTLYQNCVKHGINFFNEFYVLDLVMTEVKEGGKTVKRPSGVVAYELATGELH
VFQAKSIVFATGGFGKIYKTTSNAHTLTGDGVGIIWRKGLPLEDMEFFQFHPTGLAGLGI
LLTEGARGEGAILRNADGERFMERYAPTIKDLAPRDIVSRCMVQEVAEGRGAGPLKDYVL
LDCTHLGAEVLETKLPDITEFARTYLGVDPVVEPVPVMPTAHYAMGGIPTNVKAEVLSDN
DTVVPGLYAAGECACVSVHGSNRLGTNSLLDINVFGKRAGNNAVEYARTADFVPLPADPA
KEIRELIEQLQASTGTERIAAIRKELQDEMDKKAQVFRTEESLGEMMEIIVGLRERYKNI
AVQDKGKRFNTDLLEAIELGFLLDLAEVVVYSARNRHESRGGHMRDDYPKRDDEGYMQHT
MAYLTGDPHSSHADDHIDLDWKPVVITNYQPMERKY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggcaaagcggacaggcctgttccccaagctcgtctcggatcgaggtgcgcag
cccggcgaagcggagcgcaacgccgagagcacctcgtcgtgggccacccagggcaccggt
gagacgaccgacggcgtgcaccaccaccagttcgacgtcgtgatcgtgggcgccggcggg
gctgggatgcgcgcggcgatcgaggcgggcccgaaggcgaagaccgcggtcatctcgaag
ctctaccccacccggtcgcacacgggtgcggcgcagggcggcatggcggcggcgctcgcg
aacgtcgaggaagacagctgggagtggcacaccttcgacaccgtcaagggcggcgactac
ctcgtcgaccaggacgcggccgagatcctcgccaaagaggcgatcgacgcggtcatcgac
ctcgagaacatgggtctgcccttcaaccgcacgcccgacggcaagatcgaccagcgtcgc
ttcggcggtcacacctccgagcacggcaaggcgccggtgcgtcgcgcctgctacgcggcc
gaccgcacgggtcacatgatcctgcagacgctgtatcagaactgcgtcaagcacggcatc
aacttcttcaacgagttctacgtgctcgacctcgtcatgaccgaggtgaaggagggcggc
aagacggtcaagcgcccctccggtgtcgtggcctacgagctcgcgaccggtgagctgcac
gtcttccaggccaagtcgatcgtcttcgccaccggcggattcggcaagatctacaagacc
acctccaatgcccacaccctcaccggtgacggcgtcggcatcatctggcgcaagggtctg
ccgctcgaggacatggagttcttccagttccacccgaccggcctcgcggggctcggcatc
ctcctcaccgagggtgcccgcggcgagggcgcgatcctgcgcaacgccgacggcgagcgg
ttcatggagcgttacgcgccgaccatcaaggacctggcgccccgcgacatcgtttcgcgc
tgcatggtgcaagaggtcgcagagggtcgtggcgccggtccgttgaaggactacgtgctg
ctcgactgcacccacctgggtgccgaggtgctggagacaaagctgcccgacatcacggag
ttcgcgcgcacctacctcggtgtcgacccggtcgtcgagccggtgccggtcatgccgacc
gcgcactacgcgatgggcggcatcccgaccaacgtcaaggccgaggtcctctccgacaac
gacaccgtcgtccccggcctctacgccgccggcgagtgcgcgtgcgtctcggtgcacgga
tcgaaccgtctcggcaccaactcgcttctcgacatcaacgtgttcggcaagcgcgccggc
aacaacgcggtcgagtacgcccgcaccgccgacttcgtgccgcttcccgccgacccggcg
aaggagatccgcgagctcatcgagcagctgcaggcctccaccggcaccgagcggatcgcc
gcgatccgcaaggagctgcaggacgagatggacaagaaggcccaggtgttccgcaccgag
gagtcgctcggcgagatgatggagatcatcgtcggcctccgcgagcggtacaagaacatc
gccgtgcaggacaagggcaagcgtttcaacaccgacctgctcgaggccatcgagctgggc
ttccttctcgacctcgccgaggtcgtcgtctactcggcccgcaaccggcacgagagccgc
ggcggccacatgcgcgacgactacccgaagcgcgacgacgagggctacatgcagcacacc
atggcgtacctgacgggcgacccgcactcctcgcacgccgacgaccacatcgatctcgac
tggaagccggtcgtgatcacgaattaccagccgatggagaggaagtactga
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