Herbiconiux sp. L3-i23: L3i23_04460
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Entry
L3i23_04460 CDS
T08550
Symbol
gmd_2
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh00051
Fructose and mannose metabolism
heh00541
Biosynthesis of various nucleotide sugars
heh01100
Metabolic pathways
heh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
L3i23_04460 (gmd_2)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L3i23_04460 (gmd_2)
Enzymes [BR:
heh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
L3i23_04460 (gmd_2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BDI21670
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Position
complement(468845..469831)
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AA seq
328 aa
AA seq
DB search
MSKRALITGITGQDGLYLAELLLSKGYEVYGLIRGQNNPKYDLVTRVVPDVKLVTGDLTD
VASLVRVLGIAKPDEVYNLGAISFVAYSWENASLTSDVTGKGVLNMLEATRLYAGDDPAS
VRFYQASSSEMFGKVQQVPQTEETLLWPRSPYGVAKVFGHYMTINYRESYGMHASSGILF
NHESPRRGPEFVTRKVTIAAARIKHGLQDKLVLGNLDARRDWGFAGDYVRAMWAMLQQDR
ADDYVVSTNETHSIKELLEVAFDAAGLGDWSQYVEQDPAFFRPAEVDLLIGDATKAHTKL
GWKPEVSFTQLVQMMVESDLALARDGKL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaagcgtgcactgatcaccgggatcaccggccaggacggcctctacctcgccgag
ctgctgctgtcgaaggggtacgaggtctacgggctgatccgcggtcagaacaatccgaag
tacgacctggtcacccgtgtggtccccgacgtgaagctggtcaccggtgacctgaccgac
gtcgcttcgctcgtgcgggtgctcggcatcgcgaagcccgacgaggtctacaacctgggc
gccatctcgttcgtcgcgtactcgtgggagaacgcgtcgctcaccagcgacgtcaccggc
aagggcgtgctcaacatgctcgaggcgacgcgcctctacgcgggcgacgacccggcgtcg
gtgcggttctaccaggcgtcgtcgtcggagatgttcggcaaggtgcagcaggtgccgcag
accgaggagacgctgctctggccgcgctccccctacggagtggcgaaggtgttcggccac
tacatgacgatcaactaccgcgagtcgtacggcatgcacgcctcgagcggcatcctcttc
aaccacgagtcgccgcgtcgcggacccgagttcgtgacccgcaaggtgaccatcgccgcc
gcgcgcatcaagcacggcctgcaggacaagctcgtgctcggcaacctcgacgcccgccgc
gactggggcttcgcgggcgactacgtgcgcgccatgtgggcgatgctgcagcaggaccgg
gccgacgactacgtcgtctcgacgaacgagacccactccatcaaggagctgctcgaggtc
gccttcgacgccgcggggctcggcgactggtcgcagtacgtcgaacaggacccggcgttc
ttccgccccgccgaggtcgatctgctgatcggcgacgccacgaaggcgcacacgaagctt
ggctggaagcccgaggtctcgttcacgcagctggtgcagatgatggtcgagagcgacctc
gctctcgcccgcgacggcaagctctga
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