Herbiconiux sp. L3-i23: L3i23_05060
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Entry
L3i23_05060 CDS
T08550
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
heh03000
]
L3i23_05060
Transcription factors [BR:
heh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
L3i23_05060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_IclR
Toprim_3
HTH_23
MarR_2
HTH_10
HTH_31
HTH_3
Sigma70_r4
MerR
HTH_AraC
HTH_24
HTH_Crp_2
HTH_AsnC-type
TrmB
TetR_N
Motif
Other DBs
NCBI-ProteinID:
BDI21730
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Position
531434..532489
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AA seq
351 aa
AA seq
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MREGGEFLPGGRRATIKEVAEAAGVSRSTASRALTGNGYVAEAVKLRVRQAASDLGYVVD
AMARSLKQQSTRSIGVLVSDLRNEFYANLAAGASRQATRLGYTMMLIDHQGIPEDELAAA
EALVALRVAGVVATPVSADATEFLLRQRIPVVEVDRRFSDGACDAVVIDNRSAARSMTKQ
LIEQGHRRIALLIDEEDWTTGRERREGYADALEAAGIAQDRKLVVPTGWDVADALEVARE
LLASSERPTAVFAANNVLAEGVWRAASSLGMRIPDDLSLVAFDDVPWMSMVTPGVTAVDQ
DAAAMGRTAVQTLLDRIADPAGGTKTVVLSASINQRGSTATPAEVAAPLAD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaggcggcgagttcctgccgggcgggcgtcgcgcgaccatcaaagaggtcgcc
gaggccgcgggtgtctcacgatcgacggcctcgcgggcgctgacgggcaacgggtacgtc
gccgaagccgtcaagctgcgggtgcgccaggcggcgagcgacttgggttatgtcgtcgac
gcaatggctcgcagtctcaagcagcagtcgacgcggtccatcggggtgctcgtctccgat
ctgcgcaacgagttctacgcgaacctcgcggcgggtgccagccgtcaggccactcggctc
ggctacacgatgatgctcatcgaccaccagggcatccccgaggacgagctggcggcggcc
gaggcgctcgtcgcgctgcgcgtcgcgggagtggtggcgaccccggtgtcggcggatgcg
accgaattcctgctgcggcagcgcatccccgtcgtcgaggtcgaccgccggttctccgac
ggcgcctgcgacgccgttgtgatcgacaaccgcagcgccgcccggtcgatgacgaagcag
ctgatcgaacagggccaccgtcgcatcgcgctcctcatcgacgaggaggactggacgacc
ggacgcgagcgccgcgagggctacgccgacgcgctcgaagcggccggcatcgcgcaggac
cggaagctcgtcgtgccgaccgggtgggacgtcgccgacgccctcgaggtcgcgcgcgaa
ctgctcgcctcgtccgagcggcccacggcggtgttcgcggcgaacaacgtgctcgccgag
ggtgtctggcgtgccgcgtcgtcgctcgggatgcgcatccccgacgacctcagcctcgtc
gccttcgacgacgttccctggatgagcatggtgactcccggcgtcaccgccgtcgaccag
gacgccgcggcgatgggacgcacggccgtgcagacgctgctcgaccgcatcgccgatccc
gccggcggaacgaagacggtcgtcctctcggcgtcgatcaaccagcgcggctccacggcg
actcccgcggaggtcgcggctcctctcgccgactga
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