Herbiconiux sp. L3-i23: L3i23_05070
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Entry
L3i23_05070 CDS
T08550
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_05070
Enzymes [BR:
heh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
L3i23_05070
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
L3i23_05070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BDI21731
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All DBs
Position
532570..534042
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AA seq
490 aa
AA seq
DB search
MATPRTRWLFAGQLGPLFDDGGPILLVEARSVFARRPMHRAKAHLILSAMRHRVRELGDR
VEYRQVDRFDEVVDGRDDLEVIDPTSWAARRFVRERGMRVLPSRGFITSEADFRDWADSR
GGKRLLMEDFYRTVRERTGLLMEGAAPVGGQWNYDHDNREPPPKGAARLGLPDPWWPVED
DIDEQARADLDRWERDGLITLVGDDGPRRFAATADEARRALDDFVESRLMDFGPFEDATL
SGDWTMAHSLLSAPMNLGLLDPRIVVDEAVAAYDRGDAPLSSVEGFVRQIAGWRDYMWHL
YWYLGESYPTDHNALEATEPLPEAFVQLDPDRIEANCLSETVDGLRRHGWAHHIQRLMVL
GNWSLQRGYDPLELNHWFTGMFVDGTPWVMPANVIGMSQHADGGIVATKPYAAGGAYINR
MSDYCGGCRFDPKVRLGENACPFTAGYWAFLDRNQQRLAGNSRMRRPLAGLRGLSDLEVV
VDQERRRDTW
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacccctcgaacgcgctggctcttcgccggtcagctcggaccgctcttcgacgac
ggcgggcccatccttctcgtcgaggcccgatcggtgttcgcgcgtcggccgatgcaccgc
gcgaaggcgcacctcatcctgtcggcgatgcggcatcgggtgcgcgagctcggcgaccgg
gtcgagtatcgccaggtcgaccggttcgacgaggtcgtcgacggccgcgacgatctcgag
gtgatcgatccgacatcatgggcggcccgccgcttcgtgcgcgagcgcgggatgcgggtg
ctgccgagccggggcttcatcacgagcgaggccgacttccgcgactgggccgactcgcgc
ggcggcaagcggctgctgatggaggacttctaccgcacggtccgcgagcgcacggggttg
ctcatggagggcgctgctccggtcggcggacagtggaactacgaccacgacaaccgcgag
ccgccgccgaagggcgctgcgcgactcgggctgcccgacccgtggtggccggtcgaggac
gacatcgacgagcaggcacgggccgacctcgaccggtgggagcgcgacgggctgatcacc
ctcgtgggcgacgacggtccgcgccggttcgctgcgacggccgacgaggcgaggcgcgcc
ctcgacgacttcgtcgagtcgcgcttgatggacttcgggccgttcgaggacgcgacgctg
tcgggcgactggacgatggcgcactcgctgctcagcgctccgatgaacctcggcctgctc
gaccccaggatcgtcgtcgacgaggcggtcgcggcctacgaccgcggagatgcacccttg
agcagcgtcgaaggcttcgtccgccagatcgcgggctggcgcgactacatgtggcacctc
tactggtacctcggcgagtcgtacccgaccgatcacaacgcgctcgaggcgaccgagccg
ctgcccgaggcgttcgtgcagctcgaccccgaccgcatcgaggccaactgcctgagcgag
accgtcgacgggctgcgcaggcacggctgggcgcaccacatccagcgcctgatggtgctc
ggcaactggtcgctgcagcgcggctacgacccgctcgagctcaaccactggttcacgggc
atgttcgtggacggcaccccatgggtgatgcccgccaacgtgatcggcatgtcgcagcac
gccgacgggggcatcgtcgcgacgaagccgtacgccgcgggcggcgcctacatcaatcgc
atgtcggactactgcggcggctgccggttcgacccgaaggtccgcctgggcgagaacgcc
tgcccgttcacggccggctactgggccttcctcgaccgcaaccagcagaggctggccggc
aacagcaggatgcgtcgcccgctcgccggactgcggggcctttccgacctcgaggtcgtc
gtcgaccaggagcgtcggcgggacacgtggtga
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