KEGG   Herbiconiux sp. L3-i23: L3i23_06530
Entry
L3i23_06530       CDS       T08550                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
heh  Herbiconiux sp. L3-i23
Pathway
heh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:heh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    L3i23_06530 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:heh03400]
    L3i23_06530 (mutM)
Enzymes [BR:heh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     L3i23_06530 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     L3i23_06530 (mutM)
DNA repair and recombination proteins [BR:heh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     L3i23_06530 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N PknG_rubred zf_C2H2_13 Auto_anti-p27
Other DBs
NCBI-ProteinID: BDI21877
LinkDB
Position
694296..695201
AA seq 301 aa
MPELPEVETVRAGLAPVVSGASVTGVRVLDGRSLRRHLGPVESFADELVGATFAGAVRRG
KFLWLPIEGVDRALVAHLGMSGQVLLRTSDAEDDRLLRIRIEIDSPEHGPLSLAFVDQRI
FGSMAIDDLLPGDGRAAGFGSDDPRVPGQVAHIARDPLDPAFDERAFFAALRRRNTGIKR
ALLDQTLVSGVGNIYADEALWAAKLHFETPTSTLSRPKATTLLAELRSVLARALEDGGTS
FDAQYVNVNGASGYFSQRLNAYGQQGKPCARCGRPIARTAFMNRSSHYCPHCQRLPRLKT
P
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgccagaactgcccgaggtcgagaccgtccgcgccgggctcgcgcccgtcgtctccggt
gcgtcggtcaccggggtacgggtgctcgacggccgctccctgcgccgccacctgggtccg
gtcgagtcgttcgccgatgagctcgtcggggcgacgttcgcgggagcggtgcgtcgcggc
aagttcctgtggctgcccatcgagggagtcgaccgtgctctcgtcgcacacctggggatg
agcggccaagtgctgctgcgcacgtccgacgccgaggacgatcgactgctgcgcatccgg
atcgagatcgactcgcccgagcacgggccgctcagcctcgccttcgtcgaccagcggatc
ttcgggtcgatggcgatcgacgatctgctaccgggcgacgggagggcggcgggcttcgga
tccgacgatccgcgcgtgccagggcaggtcgcgcacatcgcgcgggatccgctcgatccc
gccttcgacgagcgcgcgttcttcgccgcactgcgacgcaggaacaccggcatcaagcgg
gcgctcctcgaccagaccctggtgagcggcgtcggcaacatctacgccgacgaagccctg
tgggcggcgaagctgcacttcgagacgccgacctcgacgctcagccgcccgaaggcgacg
acgctgctcgccgagctgcgttcggtgctcgcccgagcgctcgaggacggcggcacgagc
ttcgacgcccagtacgtgaacgtgaacggcgcctccggctacttctcgcagcgcctgaac
gcctacggccagcaggggaagccgtgcgcgcgatgcgggcgaccgatcgcccgcacggcc
ttcatgaaccgctcgagccactactgcccccactgccaacgcctcccgcgcctgaagacc
ccctaa

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