KEGG   Herbiconiux sp. L3-i23: L3i23_06720
Entry
L3i23_06720       CDS       T08550                                 
Name
(GenBank) hypothetical protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
heh  Herbiconiux sp. L3-i23
Pathway
heh02024  Quorum sensing
heh03060  Protein export
heh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:heh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    L3i23_06720
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    L3i23_06720
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    L3i23_06720
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:heh02044]
    L3i23_06720
Enzymes [BR:heh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     L3i23_06720
Secretion system [BR:heh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   L3i23_06720
  Eukaryotic Sec-SRP protein
   L3i23_06720
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA nSTAND3 AAA_31 cobW ArsA_ATPase AAA_22 AAA_30 Zeta_toxin APS_kinase MMR_HSR1 AAA_33 MeaB AAA_18 AAA_16 AAA_17 TsaE AAA_25 ParA NPHP3_N AAA_24 SLFN-g3_helicase nSTAND_NTPase7 Thymidylate_kin ABC_tran NAT10_TcmA_helicase nSTAND_NTPase5 6PF2K MobB Mod_r ATP_bind_1 NACHT AAA_26
Other DBs
NCBI-ProteinID: BDI21896
LinkDB
Position
713935..715374
AA seq 479 aa
MPPDVNLDVVKDFTGKVRERALEASTSQALNPAQQVVQIVNEELVGILGGKQRRLEFAKQ
PPTVIMLAGLQGAGKTTLAGKLAKWLTKEGHTPLLVAADLQRPNAVTQLQVVGEQAGANV
YAPEPGNGVGNPVKVAKESIKFARDKQYDVVIVDTAGRLGVDAELMKQAADIRKAVDPDE
VLFVIDAMIGQDAVNTAKAFQDGVDFTGVVLSKLDGDARGGAALSVAQVTERPIIFASTG
ESLDDFEPFHPDRMASRILDLGDILTLIEQAQQAFDEEEARKVAEKFATDSFTLDDFLRQ
MQQLRNMGSIKKMIGMLPGAKGMREQLDNFDEKEIVRTEAIIQSMTKAERVNPKILNGSR
RLRIARGSGMTVTDVNQLVQRFEQAAKMMKTVAKGGVPQMPGMGPVGAGGYGGGRKKQQQ
KKAGSRSGNPAKRAAENAARASGSAAPTSSGGSGFGLGNKGAAAPSEEELAALQKMLGR
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgccacccgacgtcaacctcgacgtcgtcaaggacttcacgggcaaggtgcgcgagcgc
gccctggaagcgagcaccagtcaggcgctgaaccccgcccagcaggtggtgcagatcgtc
aacgaggagctcgtcggcatcctcggtggcaagcagcgtcgactcgagttcgcgaagcag
ccgccgaccgtgatcatgctcgccggtctgcagggcgccggtaagacgaccctcgcgggc
aagctcgcgaagtggctgacgaaggaggggcacacccctctgctcgtcgccgccgacctc
cagcgccccaacgccgtcacccagctccaggtggtcggcgagcaggcgggcgccaacgtc
tacgcgcccgagccgggcaacggcgtcggcaacccggtgaaggtcgccaaggagtcgatc
aagttcgcgcgcgacaagcagtacgacgtcgtcatcgtcgacaccgcgggccgcctcggt
gtcgacgccgagctgatgaagcaggccgccgacatccgcaaggcggtcgaccccgacgag
gtgctcttcgtcatcgacgcgatgatcggtcaggatgcggtcaacaccgcgaaggcgttc
caggacggtgtcgacttcaccggtgtggtgctcagcaagctggacggcgacgcccgcggc
ggggccgcgctctcggtcgcccaggtcaccgagcgccccatcatcttcgcctcgaccggc
gagtcgctcgacgacttcgagcccttccaccccgaccgcatggcgagtcgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcg
cgcaaggtcgccgagaagttcgcgaccgacagtttcaccctcgacgacttcctgaggcag
atgcagcagctgcgcaatatgggctcgatcaagaagatgatcggcatgctgcccggcgcg
aagggcatgcgcgagcagctcgacaacttcgacgagaaggagatcgtgcgcaccgaggcg
atcatccagtcgatgacgaaggccgagcgggtgaatccgaagatcctcaacgggtcgcgc
cgccttcgcatcgcccgcggatcgggcatgaccgtcaccgacgtcaatcagctcgtgcag
cgcttcgagcaggccgccaagatgatgaagaccgtcgccaagggcggcgttcctcagatg
cccgggatggggcccgtgggtgccggaggttacggcggcggccgcaagaagcagcagcag
aagaaggccggatcccgttccggcaacccggccaagcgggcggccgagaacgcggcgcgc
gcttccggcagcgccgcgccgacctcgtcgggcggatccggtttcgggctcggcaacaag
ggcgctgccgcgccgagcgaggaagagctcgccgcgctgcagaagatgctcggccgctga

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