Herbiconiux sp. L3-i23: L3i23_11120
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Entry
L3i23_11120 CDS
T08550
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_11120
Enzymes [BR:
heh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L3i23_11120
DNA repair and recombination proteins [BR:
heh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L3i23_11120
Prokaryotic type
L3i23_11120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
BDI22336
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All DBs
Position
complement(1180467..1181828)
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AA seq
453 aa
AA seq
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MPSPTLVWFRDDLRVADNPALHAAVERGEPVVALYVLDEESDGVRPLGGAAKWWLHGSLE
ALARRLDELGGALVLRRGPAGRVVREVVDEIDAGLIVWNRRYGGPERDIDTELKTALDES
GREVHSLPGSLLTEPWHIETGAGEPFRVYSPFANALRSRFEHNPPRRPFAAPDALPTGSS
NAAAQSDDLGDWELLPTKPDWAGGLRETWQPGEAAGRERLDAFLHDDLAGYAKGRDRPAA
DATSLLSPYLRWGELSSPQVWHALARRTTEGAATFRRELMWREFAWHTLYAFPELHRRSW
RQEYERFPWPPLDTANLVAWQSGRTGIPLVDAGMRELWHIGHMHNRIRMTTASFLVKHLL
IDWRQGEEWFWDTLVDADAASNPFNWQWVAGSGVDAAPYFRIFNPERQAEKFDPDGEYID
RWVPDLGDADYPSPIVDLKEGRRRALDAWESVR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccccgacactcgtctggttccgagacgacctgcgcgtcgccgacaaccccgcg
ttgcacgcggcggtcgagcggggcgaaccggtggtcgccctgtacgtcctcgacgaagag
tccgacggcgtcaggccgctcggcggcgcggcgaagtggtggctgcacggatccctcgag
gcgctcgcccggcgactcgacgagctcggcggcgccctcgtgctgcgtcgcggacccgcg
ggccgcgtggtgcgcgaggtcgtggacgagatcgacgcgggcctcatcgtctggaaccgc
cgctacggcggacccgagcgcgacatcgacaccgagctgaagaccgcgctcgatgagagc
ggccgcgaggtgcacagcctccccgggtcattgctgaccgagccgtggcacatcgagacc
ggcgccggcgaaccgttccgcgtctactccccgttcgcgaacgcgctccgcagccggttc
gagcacaacccgccacgcaggccgttcgccgcccccgacgcgttgccgacaggctcctcg
aacgccgcggcgcagagtgacgatctcggcgactgggaactgctcccgacgaaaccggac
tgggcgggcggactgcgcgaaacgtggcagccgggagaggcggcggggcgggagcgtctc
gacgcgttcctgcacgacgacctcgccggctacgcgaaggggcgggaccggccggccgcc
gacgcgaccagcctactgagcccgtacctgcggtggggcgagctctcgtcaccgcaggtg
tggcatgcgctggcgcgacgcacaaccgagggcgcggcgacgttccgccgggagctgatg
tggcgcgagttcgcctggcacaccctctacgccttccccgagctgcaccggcgctcgtgg
cgacaggagtacgagcgcttcccgtggcctccgctcgacaccgcgaacctcgtcgcctgg
cagagcgggcgcaccggcatccctctcgtcgacgccggaatgcgcgagctctggcacatc
ggccacatgcacaatcgcatccgcatgacgaccgcgtcgttcctggtcaagcacctgctg
atcgactggcggcaaggcgaggagtggttctgggacaccctcgtcgacgcggatgcggcg
agcaacccgttcaactggcagtgggtcgccgggtccggggtcgacgcggcgccgtacttc
cgcatcttcaaccccgagcgtcaggccgagaagttcgaccccgacggcgagtacatcgac
cggtgggtaccggatcttggcgacgccgactacccctccccgatcgtcgatctgaaggag
gggcgccggcgtgcgctcgacgcgtgggagagcgtccgttag
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