Herbiconiux sp. L3-i23: L3i23_11610
Help
Entry
L3i23_11610 CDS
T08550
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh00061
Fatty acid biosynthesis
heh00071
Fatty acid degradation
heh01100
Metabolic pathways
heh01212
Fatty acid metabolism
heh02024
Quorum sensing
heh04146
Peroxisome
Module
heh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
L3i23_11610
00071 Fatty acid degradation
L3i23_11610
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L3i23_11610
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3i23_11610
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
heh01004
]
L3i23_11610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
heh04147
]
L3i23_11610
Enzymes [BR:
heh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
L3i23_11610
Lipid biosynthesis proteins [BR:
heh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
L3i23_11610
Exosome [BR:
heh04147
]
Exosomal proteins
Exosomal proteins of breast milk
L3i23_11610
Exosomal proteins of breast cancer cells
L3i23_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AraC_N
Motif
Other DBs
NCBI-ProteinID:
BDI22385
LinkDB
All DBs
Position
complement(1231803..1233632)
Genome browser
AA seq
609 aa
AA seq
DB search
MKQIDAPAVTQATPDDNATDLLLERVAATPDAPLFALQRGDEWVDVTARDFLDQVRALAK
GFIAAGVEPGDRIGLMAKTRYEWTLIDFAAWFAGAILVPVYETSSPHQILWNLNDGGATA
VIVEGPEHFAKFDEVHPDLPAVRNVWQIERGDLTKLVAGGAEVTDELLEERRSRAVESDI
ATIIYTSGTTGRPKGCVLTHANFVELCRNTQAAIPELIQPGQSTLLFIPTAHIFARFIAV
LCTFGGVKVGHQPDTTKLVPSLGSFRPTFLLAVPRVFEKVYNSAEQKAEAGGKGKIFRRA
ADVAIAHSKALDAGHVPFGLKVQFALFDRLVYSKLKTTLGGRVRFAVSGSAPLGTRLGHF
YRSLGIMILEGYGLTETTAPMTVNRPSKYKIGTVGPALPGVSIRIADDGEIETKGVNLFS
EYWQNEEATAEAFNDGWFKTGDIGEFDSDGYLRITGRKKELIVTAGGKNVSPAALEDPLR
ANPVVGQVVVVGDQKPFISALITLDTEMLPTWLKNNGHDETMSLEQASRDEAVLAEVQRA
VDHANSHVSRAESIRKFVIIPVEFTEASGHLTPKLSIKRNVILTDFAEVIEGIYSPDAPT
KTEGISLVH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagatcgacgcccccgccgtcacccaggccacccccgacgacaacgcaacagac
ctcctgctcgagcgcgtcgcggcgacacccgacgccccgctgttcgcgttgcagcgcgga
gacgaatgggtcgacgtcacggcccgcgacttcctcgaccaggtgcgcgccctcgccaag
gggttcatcgccgccggcgtcgagccgggcgatcgcatcggcctcatggcgaagacccgg
tacgagtggacactcatcgacttcgccgcctggttcgccggagcgatcctcgtccccgtc
tacgagacgtcgtcaccgcaccagatcctgtggaacctcaacgacggcggcgcgaccgcg
gtcatcgtcgagggtcccgagcacttcgcgaagttcgacgaggttcaccccgacctcccc
gccgtccgcaatgtctggcagatcgagcgcggcgacctgacgaagctggtcgccggcggc
gccgaggtgaccgacgagctgctcgaagaacgccgttcccgcgccgtcgagagcgacatc
gccacgatcatctacacctcgggcaccaccgggcgccccaagggctgcgtgctcacccac
gccaacttcgtcgagctgtgccgcaacacgcaggcggcgatccccgaactcatccagccg
ggccagtcgaccctcctcttcatccccaccgcgcacatcttcgcccgcttcatcgcggtg
ctgtgcacgttcggcggtgtgaaagtcggccaccagcccgacaccacgaagctggtgccg
tcgctcggctcgttccggccgacgttcctgctcgccgtcccgcgcgtgttcgagaaggtc
tacaactcggccgagcagaaggccgaggcgggcggcaagggcaagatcttccgtcgcgcc
gccgacgtcgcgatcgcccattcgaaggcgctcgacgccggacacgtgcccttcgggctc
aaggtgcagttcgccctgttcgaccggctcgtctacagcaagctgaagaccaccctcggt
ggtcgggtgcgcttcgcggtgtcgggttcggctccgctcggaacccgcctcggacacttc
taccgcagcctcgggatcatgatcctcgagggttacggcctcaccgagaccacggcgccg
atgacggtgaaccggccgagcaagtacaagatcggcaccgtcggccccgccctgccggga
gtctcgatccgcatcgccgacgacggcgagatcgagacgaagggcgtcaacctcttcagc
gagtactggcagaacgaggaggcgacggccgaggcgttcaacgacggctggttcaagacg
ggcgacatcggcgagttcgactccgacggctacctgcgcatcaccggacgcaagaaggaa
ctgatcgtcacggccggcggcaagaacgtgtcgcccgccgccctcgaggacccgctgcgc
gccaacccggtcgtcggacaggtggtcgtggtcggcgatcagaagccgttcatctcggcc
ctgatcaccctcgacaccgagatgctgcccacctggctgaagaacaacgggcacgacgag
acgatgagcctcgagcaggcctcccgcgacgaggcggtcctcgccgaggtgcagcgcgcc
gtcgatcacgcgaactcgcacgtctcccgcgccgagtcgatccgcaagttcgtcatcatc
cccgtggagttcacggaggcgagcggtcacctgaccccgaagctgagcatcaagcgcaac
gtgatcctcaccgacttcgccgaggtcatcgagggcatctactcccccgacgccccgacg
aagacggagggcatctccctggtccactga
DBGET
integrated database retrieval system
