KEGG   Herbiconiux sp. L3-i23: L3i23_13250
Entry
L3i23_13250       CDS       T08550                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
heh  Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:heh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:heh02048]
    L3i23_13250
Enzymes [BR:heh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     L3i23_13250
Prokaryotic defense system [BR:heh02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   L3i23_13250
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DUF4145 DEAD HSDR_N Helicase_C AAA_30 AAA_19 SNF2-rel_dom HSDR_N_2 DUF4407
Other DBs
NCBI-ProteinID: BDI22549
LinkDB
Position
complement(1405194..1408562)
AA seq 1122 aa
MSNFDFLKPVWPDVFTDAALAESYMATDPRSACFYGRRTVEQLVAHLYDLMALPLPYSND
LAARINDSAFKARVGVGIGQKLNLLRKAGNAAVHDTRPIRPEIALAALRELHHVLIWAAF
HYSLSPESVPKNAVFDVKLAAAPAPRLSRDQVAGLAAKFKAKDEAHAKQLAERDDLAAQQ
EAEIKRLRAKIAQAQAVATVTDDRDYNEAETRRSFIDVDLAEAGWPLTNDRDREYEVAEM
AGGQGSGYVDYVLWGSDGLPLAIVEAKRTGSSPQFGQQQAKLYADALEAQTGRRPVIFYS
NGYTHWLWDDAAGYPPREVQGFFTRDELELMEQRRRTRFPLADAPIKSEIVERPYQHRAI
KAVGDAFDRKQREALLVMATGSGKTRTVIALVDQLMNRGWVKNVLFLADRTALVRQATNA
FKEHLPSATTVNLVTDHNGEGRVYVSTYPTMMGLIDDVDAGVRRFGPGYFDLIVIDEAHR
SVYQKYGAIFGWFDAMLVGLTATPKDEVDHNTYRLFDLEDGVPTDAYSLDEAINDGFLVP
PHGVAVGTKFMRDGIKYDELTDEEKDAWDSLDWGDGDIPDEVGAEELNRFLFNEDTVDKV
LATLMVDGLKVAGGDRLGKTIIFAKSQAHAEYIQERFDAQYPEYGGQFARVITHATTYAE
TLIDDFSQADKAPHIAISVDMLDTGIDVPEVVNLVLFKLVRSTSKFWQMIGRGTRLRPDL
FGPGEDKSEFLVFDFCGNLEYFSQGLPGSEGSTQKSLTQRLFEGRVALVTALDRTVADFD
IRTSTVTWLSRVVGGMNLDNFLVKPHREQVEAWADPSRWEKLDPREVSEVAERLSGLPSA
VRDTDETAKRFDLLILTRQLAQLDGDTFTAERVRQTVQQIASVLLANTAIPSVAAQQALL
DEVAGDEWWVDVTLPMLEFVRLRLRSLARFVPRGQRLVVYTDFEDELSAAVDVDLGRPTP
GTDWQRFKQKTAAYLRDHEEHVALQRLRRNRQLTNMDLESLEQMLVSAGIVQDGDLAQAA
AESNGLGLFIRSLVGLDRVAATDAFGSYLDELRFTVDQIRFIGLIVEELTRNGVMEPRRL
FESPFTDHAPTGPEHLFSEEQVGEIVQILEEVKLHAVPSGAA
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgtcgaacttcgactttctgaagccggtctggcctgacgtgttcaccgacgccgcttta
gctgagtcgtacatggccactgacccccggtcggcgtgcttctacggtcgccgcacagtc
gagcagcttgtcgctcacctctacgacctgatggcgttgccgctcccctactccaacgac
ctcgcggcgaggatcaacgattcagccttcaaggcaagggtcggcgttggcatcggtcag
aagctcaacctgctccgcaaggccgggaacgcggccgtccacgacactcgacccatccgc
cccgagatcgcgctggccgctcttcgcgagctgcatcacgtgctgatctgggcagccttc
cactactcgctctcgcctgagtccgttccgaagaatgccgtcttcgacgtgaagcttgcg
gctgcaccagcaccgcggctgtcgcgtgatcaggtggccgggctcgccgctaagttcaag
gcgaaggacgaggcccacgccaagcagctcgccgaacgagacgacctcgctgcccagcag
gaggccgagatcaagcgcctccgggccaaaatcgctcaggcgcaagcggtcgcgacggtt
accgacgaccgcgactacaacgaggcggagacgcgccgcagcttcatcgacgtcgacctc
gccgaggcgggctggccgctcaccaacgaccgtgaccgcgaatatgaggtcgccgagatg
gcgggcggacagggcagcggatacgtcgactacgtcttgtggggaagcgacggcctcccc
cttgcgatagtcgaagccaagcgcaccggaagcagtccgcagttcggtcagcagcaggcc
aagctctacgccgatgcgctagaagcgcagaccggacggcggcccgtcatcttctactcc
aacggctacacgcactggctctgggacgacgccgccgggtatccgccccgcgaagtgcag
ggcttcttcacccgcgacgaacttgaactcatggagcagcgtcggcgcacccgtttcccg
ctcgcggatgccccgatcaagagcgagatagtcgagcgcccctaccagcaccgcgcgatc
aaagcggtcggcgacgcgttcgaccgcaagcagcgggaagcgcttctcgtgatggcaacc
ggctcgggcaagacccgcaccgtgatcgccctggtcgaccagctgatgaaccgcggatgg
gtgaagaacgtcctgttccttgccgaccgcaccgccctcgtccggcaggcgaccaacgcg
ttcaaagaacacctgccgtccgcgacgaccgtcaacctcgtcaccgaccacaacggtgaa
ggtcgcgtctacgtctccacctacccgacgatgatgggtctcatcgacgacgttgacgcc
ggggtccgccgcttcgggcccggatacttcgacctcatcgtcatcgacgaggcccaccgc
tcggtctaccagaagtacggcgccatcttcggctggtttgacgccatgctcgtcggcctg
accgcaacaccgaaggatgaggtcgaccacaacacgtatcgactcttcgatttggaggac
ggcgttcccaccgacgcctacagccttgacgaggcgatcaacgacggcttcctcgttccg
ccacacggagtcgccgttggcaccaagttcatgcgggacggcatcaagtacgacgagctg
accgacgaggaaaaggacgcgtgggactccctcgactggggcgacggcgacatcccagat
gaggtcggtgcagaagagctgaaccggttcctgttcaacgaagacaccgtcgacaaggtg
ctcgccacccttatggtcgacggcctcaaggttgctggcggcgaccggctgggcaagacc
atcatctttgcgaaaagccaggcgcacgccgaatacatccaagagcgcttcgacgcccag
tatcccgaatacggcggccaattcgcgcgagtcatcacccacgccaccacctacgccgaa
accctcatcgacgacttctcgcaggccgacaaggctccgcacatcgcaatctcggtcgac
atgctcgacaccggtatcgacgtgcccgaagtcgtcaacctcgtcctcttcaagctcgtt
cgctcgacgtcgaagttctggcaaatgatcggacgcggcactcgtctgcggcccgacctc
ttcgggccgggcgaggacaagtccgagttcctcgttttcgacttctgcggcaacctcgag
tacttcagccagggtctccccggcagcgaaggctcgacccagaagtcactcactcagcgc
ctgttcgaaggtcgtgtcgcgctcgtcaccgcccttgaccgcactgttgccgacttcgat
atccgcacgagcaccgtcacctggctgagccgcgtggtcggcgggatgaacctcgacaac
ttccttgtcaagccgcatcgcgagcaagtcgaggcatgggcggatccctcgcgctgggag
aagctcgatccgcgcgaggtgagtgaagtcgcggagcgactcagcggactcccctccgct
gtgcgcgacaccgatgagacggcgaaacgcttcgacctcctcatcctcacccgacagctc
gcacagctcgacggcgacaccttcaccgccgagcgagtccgacagacggtgcagcagatc
gcgagtgtccttctcgccaacacagccatcccctccgtcgctgcgcaacaggctctcctc
gacgaggtggcgggcgacgagtggtgggtagatgtaaccctgccaatgctcgaattcgtg
cgtctgcggctgcgctcacttgcacgcttcgtaccgaggggtcagcgcttggtcgtttac
acagacttcgaggacgagctcagtgccgctgtcgatgtggacctcgggcgccccactccc
ggcacagactggcaacggttcaagcagaagacggcggcgtatctccgagaccacgaagag
cacgtcgcgttgcagcggctgcgccgcaatcgacagctcaccaacatggaccttgaatcg
ctcgagcagatgcttgtcagcgccggcattgttcaagacggcgacctagcgcaggcagcc
gcagagtcgaacggtcttgggctcttcatccgttcactggttggtctcgaccgggttgcc
gcaactgatgccttcggtagttatctcgacgagctgcgcttcaccgttgaccagattcga
ttcatcggcttgatcgtcgaggagctgacccgcaacggggtcatggaaccgcgccgacta
ttcgaatctcccttcactgaccatgctccaaccggacccgagcaccttttcagtgaagag
caggttggcgagatcgtgcagattctcgaggaagtgaagttgcacgctgtgccctcgggt
gcggcttag

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