Herbiconiux sp. L3-i23: L3i23_14190
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Entry
L3i23_14190 CDS
T08550
Symbol
helY
Name
(GenBank) helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
heh03019
]
L3i23_14190 (helY)
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
L3i23_14190 (helY)
Messenger RNA biogenesis [BR:
heh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L3i23_14190 (helY)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
MTR4_beta-barrel
DUF4407
Motif
Other DBs
NCBI-ProteinID:
BDI22643
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All DBs
Position
1510027..1512483
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AA seq
818 aa
AA seq
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MSPELSPSERYAASRAKREAPLVETFAAGLSFEMDPFQEASCRSLEKGRSVLVAAPTGAG
KTLVAEFAAFLAMRGSRSKLFYTAPMKALSNQKFNELVDEYGPDEVGLLTGDTNVNAGAR
LVVMTTEVLRNMLYAGSALLDDLEYVVMDEVHYLADRFRGAVWEEVIIHLPEHVRLVSLS
ATVSNAEEFGDWLQAVRGDTDVIVSEERPVPLDQHVLVRSKLVDLFDTQSALDAASAGKA
ATHRVNPELVQLARYGSRTVGGRGNDVGRRHPRAPRPDSGRMDRSEMISMLGERTLLPAI
FFIFSRAGCDAAVRQVMRAGVRLTDAEERGEIRAIVEERCRTLLDEDLAVLGYWEWMEGL
LSGVAAHHAGLLPAFKEVVEELFQRKLVKVVFATETLALGINMPARTVVLEKLEKFNGEA
RVPITSGEYTQLTGRAGRRGIDVEGHAVIQWSDGLDAQAVAALASRRSYPLNSSFRPTYN
MAVNLIEQFGRARTREILESSFAQFQADRAVVDLARKVRQQEESLAGYEKAMKDDTGRSG
DFAEYAAIRREISDIERRNAQNRDRGRGQRDKDQRQLAALRQRLRSHPAHSSPRREELSR
WAERWWRLKRQTDELRRQIESRTGAVAKIFDRVSEVLLDEGYLKRGDDDLVLTGNGTMLK
RIYGERDLLVAETLRRGVWRELDPASFAALATTLVFEPRREEAVGERYLPRGAFPAALEQ
LQEIWARLDDVEQRHRLPGSNPPSTGLATAMHRWARGGRLDQVLRDADLQAGDFVRWSKQ
TIDLLDQISIVADGKQARTARQAIDAIRRGIVAYSSVG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgaactctccccgtccgagcggtatgcggcgtcccgtgccaagcgcgaggcg
ccgctcgtcgagaccttcgccgccggtctctcgttcgagatggatcccttccaagaggcg
tcctgccgctcgctcgaaaagggtcgcagcgtgctcgtcgcggcccccaccggcgcgggg
aagaccctcgtcgccgagttcgcggcgttcctcgcgatgcgcggatcgcggtcgaagctg
ttctacacggcgccgatgaaggcgctgtcgaaccagaagttcaacgagctcgtcgacgag
tacgggcccgacgaggtcggtctgctgaccggcgacacgaacgtcaacgccggcgcccgc
ctcgtggtcatgaccaccgaggtgctgcgcaacatgctgtacgccgggtcggcgctgctc
gacgacctcgaatacgtggtgatggacgaggtgcactacctcgccgaccgcttccgcggg
gcggtgtgggaggaagtgatcatccacctccccgagcacgtccgcctggtttcgctgtcg
gcgacggtgtccaacgcggaggagttcggcgactggctgcaggcggtgcgcggcgacacc
gacgtgatcgtctcggaagagcgtccggtgccgctcgatcagcacgtcctcgtgcgcagc
aagctcgtcgacctcttcgacacccagtccgcgctcgacgcggcgtcggcgggcaaggcg
gcgacgcatcgggtcaaccccgagctcgtccagctggcccgctacggctcgcgcacggtc
ggtggccgcggcaacgacgtcggccgccggcacccgcgcgcccctcgcccggacagcggg
cgcatggatcgctccgagatgatctcgatgctcggcgagcgcaccctgctcccggcgatc
ttcttcatcttcagccgcgccggctgcgacgccgcggtccgccaggtgatgcgcgcgggc
gtgcgtctcaccgacgcggaggagcgcggcgagatccgcgcgatcgtcgaagagcgctgc
aggaccctgctcgacgaggacctcgccgtgctcggctactgggagtggatggagggactg
ctctccggggtcgccgcccaccacgccggactcctgcccgcgttcaaggaggtcgtcgag
gagctcttccagcgcaagctggtgaaggtcgtcttcgcgacggagacgctggccctcggc
atcaacatgccggcccgcaccgtcgtgctcgagaagctcgagaagttcaacggcgaggcc
cgcgtgccgatcacgtcgggggagtacacgcagctcaccggtcgcgccggtcggcgcggc
atcgatgtcgaggggcacgccgtcatccagtggagcgacggtctcgatgcgcaggccgtc
gccgcgctcgcgtcacggcgcagctacccgttgaactcgagcttccgacccacctacaac
atggccgtcaacctcatcgagcagttcggccgggcgcgcacccgcgagatcctcgaatcg
agcttcgcccagttccaggccgaccgcgccgtcgtcgacctcgcccgcaaggtccgccag
caggaggagtcgctcgcgggctacgagaaggcgatgaaggatgacaccggccgaagcggc
gatttcgccgagtacgccgcgatccgccgcgagatcagcgacatcgaacgccgcaacgcc
cagaaccgcgaccgcggacgcggtcagcgggacaaggatcagcggcagctcgccgcgctg
cggcagcgcctgcgttcgcacccggcccactcgtcgccgcgccgcgaggagctctcgcgc
tgggccgagcgctggtggcggctgaagcggcagaccgacgaactgcgtcgccagatcgaa
tcgcgcaccggcgccgtggcgaagatcttcgaccgggtcagcgaggtgctgctcgacgag
ggctacctgaagcgaggcgacgacgacctcgtactcaccggcaacggcaccatgctgaag
cggatctacggcgagcgcgacctgctcgtcgccgagaccctccgtcgcggtgtgtggcgc
gaactcgaccccgcgtcgttcgcggcgctcgccaccaccctcgtcttcgagcctcggcgc
gaggaggcggtcggggagcggtacctgccccgcggtgcgttcccggccgcgctcgaacag
ttgcaggagatctgggcgcgactcgacgacgtcgaacagcggcacaggctgccgggctcc
aatccgccgtcgacgggtctcgccacggcgatgcaccgttgggcgcgcggtggccggctc
gatcaggtgctgcgcgacgccgacctgcaggcgggcgatttcgtgcggtggtcgaagcag
accatcgacctgctcgaccagatctcgatcgtcgccgacggcaagcaggcgcgtaccgcg
cgtcaggcgatcgacgcgatccggcgcggcatcgtggcgtacagcagtgtcggctga
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