Herbiconiux sp. L3-i23: L3i23_14350
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Entry
L3i23_14350 CDS
T08550
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
heh02000
]
L3i23_14350
01504 Antimicrobial resistance genes [BR:
heh01504
]
L3i23_14350
Transporters [BR:
heh02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
L3i23_14350
Antimicrobial resistance genes [BR:
heh01504
]
Gene variants
Tetracycline resistance genes
Transporters
L3i23_14350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
Folate_carrier
Motif
Other DBs
NCBI-ProteinID:
BDI22659
LinkDB
All DBs
Position
complement(1525817..1527097)
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AA seq
426 aa
AA seq
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MNSSTPRLLPRFDRAWIMLIVLTLLTVVGMTVVLPVLPFVVLRYVSSENDLAAWVGVLEA
VNGLCAFLVAPFLGRLSDRFGRRPVIIAAAFGAAFAMTLFGIGGGLWVLILARVIQGLTA
GDLPALFAYLADITPADQRAKRFGLLGALSGIGMMIGPAVGGLLAAVSVELPVFVTAAVA
LAVAILSIFLLPESLKPANRITSISLRDVQPFAVFKNAFARKELRGLLLGFGLIALPFGF
FVNNFSVLALDSIHWGPTAIGLLTAAVGIIDILIQGVLLGILLPRMGERGVIVSGIAAQI
AGLVALALVASILAQPWLFIVGALTLAAGQGAAQAAMDGAMSNSVGDDEQGWLGGATQSL
QAAMSTVAPLIAGGLYVLVSHAAPYWLGAAIMVVAAIVISRAHIASPAKKTADDAPADAV
PATAAR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaactcctcgacccctcgcctcctgccgcgcttcgatcgcgcctggatcatgctcatc
gtcctgaccctcctcactgtggtcgggatgaccgtcgtcctgccggtgctgccgttcgtg
gtactgcgctacgtctcatccgagaacgacctcgccgcctgggtgggggtactcgaagcc
gtcaacgggctctgcgcattcctcgtcgcaccgttcctcggccgcctctcggaccgcttc
gggcgtcggccggtcatcatcgcggcagccttcggggccgcgttcgcaatgacgctgttc
ggcatcggcgggggactatgggtgctgatcctcgcccgagtcatccagggactgaccgcc
ggcgacctcccggccctcttcgcctacctggccgacatcactccggcggaccagcgcgcc
aagcgcttcggcctgctcggcgccctctcgggcatcggcatgatgatcggccccgcagtg
ggaggcctgctcgccgccgtcagcgtcgaactgccggtgttcgtgaccgcagcggtcgcg
ctggccgtcgccatcctcagcatcttcctgctccccgagagcctgaagcccgccaaccgc
atcacgagcatctcgctgcgcgacgtgcagccgttcgccgtgttcaagaacgccttcgcc
cgcaaggagctccgcggtctccttctcggcttcggactcatcgcactgccgttcggcttc
ttcgtcaacaacttcagtgtgctcgccttggactcgatccactgggggccgaccgcgatc
ggtttgctcaccgcggcggtcgggatcatcgacatcctcatccagggcgtgctgctcggc
atcctgctgccgcggatgggggagcggggcgtcatcgtgagcggtatcgccgctcagatc
gcggggctcgtcgccctcgcgctcgtggcatcgatcctggcgcagccgtggctgttcatc
gtcggagcgctcacccttgccgccggccagggcgcggcccaggcggcgatggacggcgcg
atgtcgaactccgtgggagacgacgagcagggctggctcgggggagcgacgcagtccctg
caggcggcgatgagcaccgtcgccccgctgatcgcgggcggactctacgtgctcgtcagc
catgcggcgccgtactggctcggagcggcgatcatggtggttgcggcgatcgtcatcagc
cgcgcgcacatcgcgagcccggcgaaaaagacggcggacgatgcgccggcggacgccgtc
ccggcgaccgccgcccggtaa
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