Herbiconiux sp. L3-i23: L3i23_15130
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Entry
L3i23_15130 CDS
T08550
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3i23_15130 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_15130 (uvrA_2)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3i23_15130 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3i23_15130 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_25
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
BDI22737
LinkDB
All DBs
Position
complement(1603171..1606059)
Genome browser
AA seq
962 aa
AA seq
DB search
MPISPVPGPKLSVRGARVHNLRDVDLEIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRRY
VESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLWA
RVGVPHCPICGEVISRQTVQQIADQLMELETGTRYQVTAPVVQQRKGEFVDLFKELAAKG
FSRAMVDGEMAQLSDPPTLKKQYKHDIAVVVDRLVASDDLLTRLTDSLETALRLTDGIVQ
INFVDREGDTAWQTFSEKLSCPNQHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMAVDA
DLLLGDPDLSIKDGVIIPWTSQGKGLYNYYERLLKGLAKDLGFSLSTPWNKLAPEAQEAV
LRGNNFEVHVRWKNRFGREVTYSQGFEGVIPYLERNYMQAESDTQRARWAEYLREVPCAV
CHGKRLKPEVLAVRVDGRSIAEVADLSLSDASEFVNGLTLNERDVKIAAQVLREIRVRLE
FLLEVGLTYLTLSRSAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLI
DTLVKLRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGEGGGKVVHSGGYDTLLTNTESVT
GDYLSGRRAIETPKKRRKIDRKRMLTVVGAQANNLKNVSAEFPLGVFTSVTGVSGSGKST
LVNDILYRVLANRLNGARKVAGKHTRVTGVDNLDKVVHVDQAPIGRTPRSNPATYTGVFD
RIRTLFSETIEAKSRGYQPGRFSFNVKGGRCENCQGDGTIKIEMNFLPDVYVVCEVCQGA
RYNRDTLAVHYKGKNIAEVLDMPISEAAEFFEPISAIHRYLKTLVDVGLGYVRLGQSATT
LSGGEAQRVKLATELQRRSNGRTVYVLDEPTTGLHFEDVQKLLMVLNSLVEKGNTVICIE
HNLDVIKSSDWIVDMGPEGGSGGGTVVASGTPEKIAGIEESHTGRFLAEILYGEARSLSR
AS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatttcccccgttcccggtcccaagctcagcgtgcgcggagcacgcgtccacaac
ctccgcgacgtcgacctcgagatcccgcgcgactcgctcgtcgtgttcaccgggctctcc
ggatcgggcaagtcgagcctcgcgttcgacaccatcttcgccgaggggcagcgtcgctac
gtcgaatcgctgtccgcgtacgcccggcagttcctcggccaggtcgaccgccccgacgtc
gacttcatcgagggtctgagccccgcggtctcgatcgaccagaagtcgaccaaccgcaac
ccgcgctccacggtcggcaccatcaccgagatctacgactacatgcgtctgctgtgggcg
cgcgtcggcgtgccgcactgtccgatctgcggcgaggtcatctcgcggcagacggtgcag
cagatcgccgaccagctgatggagctcgagacgggcacccgataccaggtgacggcgccg
gtcgtgcagcagcgcaagggcgagttcgtcgacctcttcaaggagctcgcggcgaagggc
ttctcccgcgccatggtcgacggcgagatggcgcagctgagcgacccgccgaccctgaag
aagcagtacaagcacgacatcgcggtcgtcgtcgaccgcctcgtcgcctccgacgacctc
ctcacccgtctcaccgattcgctcgagacggcgctccgtctcaccgacgggatcgtgcag
atcaacttcgtcgaccgtgagggcgacaccgcgtggcagacgttcagcgagaagctgtcc
tgcccgaaccagcacccgattcagctcaccgagatcgaaccgcgcaccttctcgttcaac
gccccgttcggcgcgtgccccgaatgctccggcctcggcacccgcatggcggtcgacgcc
gacctgctgctcggcgaccccgacctgagcatcaaggacggcgtcatcatcccctggacc
agccagggcaaggggctctacaactactacgagcgcctcctcaaggggctcgcgaaggac
ctcggcttcagcctcagcacgccgtggaacaagctcgcccccgaagcgcaggaggcggtc
ctgcggggcaacaacttcgaggtgcacgtgcggtggaagaaccgcttcggccgcgaggtc
acctactcgcagggcttcgagggcgtgatcccgtacctcgagcgcaactacatgcaggcc
gagtccgacacgcagcgggcgcggtgggccgagtacctgcgcgaggtgccgtgcgcggtc
tgccacggcaagcgtctcaagcccgaggtgctcgcggtccgcgtcgacggcaggagcatc
gccgaggtcgccgacctgagcctctcggacgcgagcgagttcgtgaacgggctcacgctc
aacgagcgcgacgtgaagatcgccgcacaggtgctgcgtgagatccgggtgcgcctcgag
ttcctgctggaggtgggactcacctatctgacgctcagccgttcggcgggatcgttgtcc
ggaggcgaggctcagcgcatccgcctcgcgacccagatcggttcggggctcaccggcgtg
ctctacgtgctcgacgagccgagcatcggtctgcaccagcgcgacaaccgtcggctcatc
gacacgctcgtcaaactgcgcgatctcggcaacaccctcattgtcgtcgagcacgacgag
gacaccatccgcaccgccgactggatcgtcgacatcggccccggcgccggcgagggcggt
ggcaaggtcgtccactcgggcggctacgacacgctgctcaccaacaccgagtccgtgacg
ggcgactacctctccggccggcgcgcgatcgagacgccgaagaagcgccgcaagatcgac
aggaagcgcatgctgaccgtcgtcggtgcgcaggcgaacaacctgaagaacgtgtcggcc
gagttcccgctcggagtcttcacctccgtgaccggtgtcagcggctcgggcaagagcacg
ctcgtgaacgacatcctctaccgggtgctcgccaaccggttgaacggggcgcgcaaggtc
gcgggcaagcacaccagggtgaccggcgtcgacaacctcgacaaggtggtgcacgtcgac
caggcgccgatcggacgcaccccgcgatcgaatcccgccacctacacgggcgtgttcgac
cgcatccgcaccctgttcagcgagaccatcgaggcgaagtcgcgcggctatcagccgggc
cgattcagcttcaacgtcaagggcggccgctgcgagaactgccagggcgacggcacgatc
aagatcgagatgaacttccttcccgacgtttacgtcgtctgcgaggtgtgccagggcgcc
cgctacaaccgcgacaccctcgccgtgcactacaagggcaagaacatcgccgaggtcctc
gacatgccgatctccgaggccgccgagttcttcgagccgatctccgcgatccaccgctac
ctcaagaccctcgtcgacgtcggcctcggctacgtccgcctcggtcagagcgccacgacg
ctctccggtggcgaggcgcagcgcgtgaagctggcgaccgaactgcagcggcgctccaac
ggacgcaccgtctacgtgctcgacgagccgacgacgggactgcacttcgaggacgtgcag
aagctgctgatggtgctcaactcgctcgtcgagaagggcaacacggtcatctgcatcgag
cacaacctcgacgtgatcaagtcgtccgactggatcgtcgacatgggtcccgaaggcggg
tccggtggcggcaccgtcgtcgcgagcggcacaccggagaagatcgcgggcatcgaggag
agccacaccggtcgcttcctcgccgagatcctctacggcgaggcccggtcgctctcgcgc
gcatcgtag
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