Herbiconiux sp. L3-i23: L3i23_15860
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Entry
L3i23_15860 CDS
T08550
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L3i23_15860 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_15860 (ruvB)
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i23_15860 (ruvB)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3i23_15860 (ruvB)
RecFOR pathway proteins
L3i23_15860 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
Sigma54_activ_2
Rad17
MCM
Zeta_toxin
nSTAND3
AAA_14
IstB_IS21
AAA_18
AAA_25
NB-ARC
NTPase_1
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDI22810
LinkDB
All DBs
Position
complement(1688137..1689162)
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AA seq
341 aa
AA seq
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MTDPAMTPAPESEAELAFEGALRPKSLGDFVGQAKVRGQLQLLLQAAALQNRAPDHILLA
GPPGLGKTTLAMIVSHESGRPLRMSSGPAIQHAGDLAAVLSSLVPGEILFIDEIHRMARS
AEEMLYLAMEDFRIDIMVGKGAGATSIPLDLAPFTLVGATTRSGLLPNPLRDRFGFTAHL
EFYETEELEQVLARAADLLELEVDRSALREIAGRSRGTPRIANRLLRRVRDYSLVHRTAA
GHDAVDAALELYDVDPIGLDRLDRAVMLAILERFDGGPVGLGTLAVSVGEEAETIESVVE
PFLVRVGLLGRTPRGRVATPAAYRHFGIQRSVAGATLWADS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatccggcgatgactcccgcgcccgaatccgaggccgaactcgccttcgaaggc
gccctccgcccgaagtcgctcggcgatttcgtcgggcaggccaaggtgaggggtcagctc
caactgctcctccaggccgccgcactgcagaaccgcgcgcccgaccacatcctcctcgcc
ggtccgccggggctcggcaagacgacgctcgcgatgatcgtctcgcacgagagcggacgc
ccgctgcgcatgtcgagcggtcccgccatccagcacgccggcgacctcgcggccgtcctg
tcctcgctcgtccccggagagatcctcttcatcgacgagatccaccgcatggcgcgctcg
gcggaggagatgctctacctcgccatggaggacttccgcatcgacatcatggtcggcaag
ggagcgggggctacgtcgatcccgctcgatctcgccccgttcaccctcgtgggcgcgacc
acccgctcggggctgcttccgaacccgctgcgcgaccgcttcggcttcaccgcccacctc
gagttctacgagaccgaagagctcgaacaggtcctcgcccgcgcggccgacctcctcgaa
ctcgaggtcgaccgctcggcgctgcgcgagatcgccggacgcagccgcggcacgccgcgc
atcgcgaatcggctgctgcggcgggtgcgcgactactcgctggtgcaccgcacggccgcc
ggtcacgacgcggtcgatgcggcgctcgagctctacgacgtcgacccgatcggactcgac
cgtctcgaccgcgcggtgatgctcgccatcctcgaacgcttcgacggcggtccggtcggc
ctcggcacgctcgcggtgtccgtcggcgaggaggccgagaccatcgagtcggtcgtcgag
ccgttcctcgtgcgagtcgggctgctcggccgaacaccgcgcggacgcgtcgccacgccc
gccgcctaccgtcacttcggcatccaacgttcggtggccggcgccacactctgggcggac
tcatag
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