Herbiconiux sp. L3-i23: L3i23_16310
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Entry
L3i23_16310 CDS
T08550
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_16310
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_16310
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L3i23_16310
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Topoisomerases
L3i23_16310
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3i23_16310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BDI22855
LinkDB
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Position
1734924..1737377
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AA seq
817 aa
AA seq
DB search
MTAAADGSGGIVERIQDVDVSTEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILYQMA
EMGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDALVRLAQPFTMRLPLVDGHGNFGSLD
DGPAASRYTEARLAPAAMAMVENLDEDVVDFVPNYDNQLTQPEVLPAAFPNLLVNGASGI
AVGMATNMAPHNLIEVVAGARHLIENPDATLDEIMRFIPGPDLPTGGTISGLDGIRDAYA
TGRGTFRTRARVTIEAITPRKQGLIVTELPYLVGPERVIEKIKDGVQAKKIQGISDVNDL
TDRKHGLRLVIGIKTGFSPEAVLEQLYRLTPLEESMGINNVALVDGGPRTLGLIELLQVY
ISHRIEVVTRRTRYRLDRRRERLHLVEGLLVAILDIDEVIQVIRSSDDSEAARTRLVQVF
DLSQVQAEYILELRLRRLTRFSRIELETERDELRAEIAYLEELLGSDQKLRELVSDELDA
TAEKYGTPRRTLLTEAPASAAGSARGKKAAVSLEIADVPGIVLLSTTGRAVRVDLPDGGS
LERPARRSKHDAILSQIAGSSRGELGAVTSTGRVVRFTPVDLPSVPSNSVQLAAGAKIAD
YLGLPKNERVLALVSLTSDEPIALGTKTGVVKRVSTGAYPNKPDFEVIALKKGDEVVGAV
QTPDEAELVFVSSDAQLLHYAAALVRPQGVSAGGMAGINLSADATAIFFGAVAKPEHAVV
ATISTSSAALPGTDNGRAKVSLFVDFPAKGRATGGVRSHSFLKGEDALALAWVGTDPAYA
LGSDGAVRSLPDPGARRDASGVALDAAVASIGSPVAS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcagccgacggctcgggcggcatcgtcgagcgcatccaggacgtcgacgtc
tcgaccgagatgcaggggtcgttcctcgagtacgcgtactccgtcatctactcccgcgcg
ttgcccgacgcccgcgacggcctgaagccggtgcagcggcgcatcctctaccagatggcc
gagatgggactgcgtcccgatcgcggacacgtgaagtcggcgcgcgtcgtcggcgaggtc
atgggcaagctccacccacatggcgactccgcgatctacgacgccctcgtccgtctcgcg
cagcccttcaccatgcgcctgccgctcgtcgacggtcacggcaacttcggctccctcgac
gacgggcccgccgcctcccgctacaccgaggcgcgactcgcccccgcggcgatggcgatg
gtcgagaacctcgacgaggacgtcgtcgacttcgtccccaactacgacaaccagctgacc
cagcccgaggtccttcccgccgcgttcccgaacctgctcgtgaacggtgccagcggcatc
gcggtcggcatggcgacgaacatggctccgcacaacctcatcgaggtcgtcgcgggcgcc
cgacacctcatcgagaaccccgacgcgacgctcgacgagatcatgcgattcatccccggc
cccgacctcccgaccggcggcacgatctcggggctcgacggcatccgcgacgcctacgcg
acgggacgcggcacgttccgcacccgtgcgcgcgtcacgatcgaggcgatcaccccgcgc
aagcaggggctcatcgtcaccgaactcccctacctcgtcggccccgaacgggtcatcgag
aagatcaaggacggggtgcaggccaagaagatccaaggcatctccgacgtcaacgacctc
acggaccgcaagcacgggctgcgcctcgtgatcggcatcaagacaggcttcagccccgaa
gcggtgctcgaacagctgtaccgcctcactcccctcgaggagtcgatggggatcaacaac
gtcgccctggtcgacggcggcccgcgcaccctgggcctcatcgagctgctccaggtctac
atctcgcaccgcatcgaggtcgtcacgcggcgcacgcgctaccgcctcgaccgccggcgc
gaacgactgcacctcgtcgagggtctgctcgtcgcgatcctcgacatcgacgaggtcatc
caggtcatccgcagcagcgacgactccgaggccgcgcggacacggctggtgcaggtcttc
gacctctcgcaggtccaggccgagtacatcctcgaactgcgtctacgccgcctcacccgc
ttctcgcggatcgagctcgagaccgagcgcgacgagctgcgtgccgaaatcgcctacctc
gaggagctcctcggcagcgatcagaagctgcgggagctcgtgtccgacgagctcgacgcg
accgccgagaagtacggcacgccccgtcgcacgctcctcaccgaggcgcccgcctccgcc
gccggcagtgcccgcggcaagaaggcggccgtgtcgctcgagatcgccgacgtcccgggc
atcgtgctgctgtcgacgacggggcgggcggtccgcgtcgacctgcccgacggcggttcg
ctcgaacgtcccgcgcgccgcagcaagcacgacgccatcctgtcgcagatcgcaggatcg
agccgcggtgagctcggcgccgtgacctcgacgggacgcgtcgtccgcttcaccccggtc
gacctcccgtcggttccatcgaactcggtgcagctcgcggccggtgcgaagatcgccgac
tacctcggactgccgaagaacgagcgggtgctcgccctcgtctcgctcaccagcgacgag
ccgatcgcgctcggcacgaagaccggagtggtgaagcgggtcagcaccggcgcctacccg
aacaagcccgatttcgaggtcatcgccctgaagaagggcgacgaggtcgtcggcgccgtg
cagacgcccgatgaggccgagctcgtcttcgtgagcagcgacgcccagctcctgcactac
gccgccgcgctcgtgcgaccgcagggcgtgtccgccggaggcatggccggcatcaacctg
tcggccgacgcgaccgccatcttcttcggagccgtcgcgaagcccgagcacgcggtggtc
gcgaccatctcgacctcgtcggcggcgctgcccggaaccgacaacgggcgcgccaaggtc
tcgctcttcgtcgacttcccggcgaaggggcgcgcgaccggcggcgttcgctcgcactcg
ttcctcaagggcgaggatgcgctggcgctggcgtgggtcggcaccgacccggcttacgcc
ctcggctccgacggcgcggtgcgctcgctgcccgacccgggtgcgcgtcgcgacgcgtcc
ggcgtcgctctcgacgccgcggtggcatcgatcggctcccccgtcgcgagctga
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