Herbiconiux sp. L3-i23: L3i23_16660
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Entry
L3i23_16660 CDS
T08550
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3i23_16660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
heh03021
]
L3i23_16660
Transcription machinery [BR:
heh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3i23_16660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC27
Motif
Other DBs
NCBI-ProteinID:
BDI22890
LinkDB
All DBs
Position
complement(1766880..1768409)
Genome browser
AA seq
509 aa
AA seq
DB search
MLSEMPDEPRETPRGADGIVVRRHDDKAVQVGYCRPSNHPPDPASPGVKGAPMTPSKTAA
VADPETVEVEATTTKRRPEPVEGKPAAKKPAAKTAAKTPAKSTAAKATTAKKAPAKKATS
KAADDDEAGEDEIDEPEEGVEDEIEEGAPEAEGDTEADSDEKSDDDDDEAKPAATVEADE
KLPTGALVLSLVDDDDEVPVYSTAITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEA
GLFAEDKLSNTDGMTKELIRELKWVAKDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLD
LIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKL
ARVQRQMLQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLI
EDTEAVVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVT
RERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtccgaaatgccggacgagccgcgggaaacgccccgtggcgccgacggcatcgtg
gttcgaaggcatgacgacaaggccgtacaggtggggtactgccgtccgtcgaatcatccg
cccgaccccgcttcccccggagtgaaaggtgcaccgatgacccctagtaagactgctgct
gtggccgaccccgagaccgtcgaggtcgaggccacgacgaccaagcgacgccctgagcct
gtcgaagggaagccggcggcgaagaagcctgcggcgaagaccgccgccaagacgcctgcg
aagtcgaccgccgcgaaggcgacgacggcgaagaaggcgcccgcgaagaaggcgacctcg
aaggccgccgacgacgacgaggccggcgaggacgagatcgacgagcccgaggagggcgtc
gaggacgagatcgaggagggcgctcccgaagcggagggcgacaccgaggccgactcggac
gagaagtccgatgatgacgatgacgaggccaagcccgccgcgaccgtcgaggccgacgag
aagctccctaccggtgcgctcgtcctctcgctggtcgacgacgacgacgaggtgcccgtc
tactcgacggcgatcaccggcgccaccgccgaccccgtcaaggactacttgaagcagatc
ggtaaggtccccctgctgaacgcggccgaagaggtcgagctcgccatgcggatcgaagcc
ggactgttcgccgaggacaagctgtcgaacaccgacggcatgacgaaggagctcatccgc
gagctcaagtgggtcgcgaaggacggacagcgcgcgaagagccacctgctcggcgcgaac
ctccgcctcgtcgtgtcgctcgcgaagcgctacacgggccgcgggatgcagttcctcgac
ctgatccaggaaggcaacctgggcctcatccgtgcggtcgagaagttcgactacaccaag
ggcttcaagttctcgacctacgccacctggtggatccgtcaggcgatcacccgtgccatg
gcagaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctc
gcccgcgtgcagcgccagatgctgcaggacctcggacgtgaacccacgcccgaggagctg
tcgcgcgagctcgacatgacccctgagaaggtcatcgaggtgcagaagtacggtcgcgag
ccgatttcgctgcacacgcctctcggcgaggacggcgacagcgagttcggcgacctgatc
gaggataccgaggcggtcgtcccggccgacgcggtgggcttcacgatgctgcagaagcag
ctcgagagcctcctcgattcgctcagcgagcgcgaggccggtgtcatccgcatgcgcttc
ggtctcggcgacggcatgccgaagaccctcgaccagatcggcgacacgttcggtgtgact
cgtgagcgcatccgccagatcgagagcaagacgatggcgaagctgcgccacccgtcgcgg
tcgcagtcgctgcgcgactacctcgagtga
DBGET
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