KEGG   Herbiconiux sp. L3-i23: L3i23_16660
Entry
L3i23_16660       CDS       T08550                                 
Name
(GenBank) hypothetical protein
  KO
K03086  RNA polymerase primary sigma factor
Organism
heh  Herbiconiux sp. L3-i23
Pathway
heh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:heh00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L3i23_16660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:heh03021]
    L3i23_16660
Transcription machinery [BR:heh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L3i23_16660
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 CDC27
Other DBs
NCBI-ProteinID: BDI22890
LinkDB
Position
complement(1766880..1768409)
AA seq 509 aa
MLSEMPDEPRETPRGADGIVVRRHDDKAVQVGYCRPSNHPPDPASPGVKGAPMTPSKTAA
VADPETVEVEATTTKRRPEPVEGKPAAKKPAAKTAAKTPAKSTAAKATTAKKAPAKKATS
KAADDDEAGEDEIDEPEEGVEDEIEEGAPEAEGDTEADSDEKSDDDDDEAKPAATVEADE
KLPTGALVLSLVDDDDEVPVYSTAITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEA
GLFAEDKLSNTDGMTKELIRELKWVAKDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLD
LIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKL
ARVQRQMLQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLI
EDTEAVVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVT
RERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq 1530 nt   +upstreamnt  +downstreamnt
gtgctgtccgaaatgccggacgagccgcgggaaacgccccgtggcgccgacggcatcgtg
gttcgaaggcatgacgacaaggccgtacaggtggggtactgccgtccgtcgaatcatccg
cccgaccccgcttcccccggagtgaaaggtgcaccgatgacccctagtaagactgctgct
gtggccgaccccgagaccgtcgaggtcgaggccacgacgaccaagcgacgccctgagcct
gtcgaagggaagccggcggcgaagaagcctgcggcgaagaccgccgccaagacgcctgcg
aagtcgaccgccgcgaaggcgacgacggcgaagaaggcgcccgcgaagaaggcgacctcg
aaggccgccgacgacgacgaggccggcgaggacgagatcgacgagcccgaggagggcgtc
gaggacgagatcgaggagggcgctcccgaagcggagggcgacaccgaggccgactcggac
gagaagtccgatgatgacgatgacgaggccaagcccgccgcgaccgtcgaggccgacgag
aagctccctaccggtgcgctcgtcctctcgctggtcgacgacgacgacgaggtgcccgtc
tactcgacggcgatcaccggcgccaccgccgaccccgtcaaggactacttgaagcagatc
ggtaaggtccccctgctgaacgcggccgaagaggtcgagctcgccatgcggatcgaagcc
ggactgttcgccgaggacaagctgtcgaacaccgacggcatgacgaaggagctcatccgc
gagctcaagtgggtcgcgaaggacggacagcgcgcgaagagccacctgctcggcgcgaac
ctccgcctcgtcgtgtcgctcgcgaagcgctacacgggccgcgggatgcagttcctcgac
ctgatccaggaaggcaacctgggcctcatccgtgcggtcgagaagttcgactacaccaag
ggcttcaagttctcgacctacgccacctggtggatccgtcaggcgatcacccgtgccatg
gcagaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtcatcaacaagctc
gcccgcgtgcagcgccagatgctgcaggacctcggacgtgaacccacgcccgaggagctg
tcgcgcgagctcgacatgacccctgagaaggtcatcgaggtgcagaagtacggtcgcgag
ccgatttcgctgcacacgcctctcggcgaggacggcgacagcgagttcggcgacctgatc
gaggataccgaggcggtcgtcccggccgacgcggtgggcttcacgatgctgcagaagcag
ctcgagagcctcctcgattcgctcagcgagcgcgaggccggtgtcatccgcatgcgcttc
ggtctcggcgacggcatgccgaagaccctcgaccagatcggcgacacgttcggtgtgact
cgtgagcgcatccgccagatcgagagcaagacgatggcgaagctgcgccacccgtcgcgg
tcgcagtcgctgcgcgactacctcgagtga

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