Herbiconiux sp. L3-i23: L3i23_20590
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Entry
L3i23_20590 CDS
T08550
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3i23_20590 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_20590 (ung)
Enzymes [BR:
heh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L3i23_20590 (ung)
DNA repair and recombination proteins [BR:
heh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L3i23_20590 (ung)
Prokaryotic type
L3i23_20590 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDI23283
LinkDB
All DBs
Position
complement(2172303..2172995)
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AA seq
230 aa
AA seq
DB search
MQAKSLAELAADGEVDPGWAEALADAQPTLTALGEFLRAEHAAGRQTLPAGPDVLRAFRR
PLAEVRVLIVGQDPYPTPGHPIGLSFATSRAVRPLPRSLANIYRELNDDLGIAPASHGDL
TSWSENGVLLLNRVLTVDAGAPGSHRRKGWERVTELAIRRLVERGGPLVAILWGNDAQTL
KPMLGDVPVIASVHPSPLSASRGFFGSRPFSRANALLEEQGAEPVDWTVR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcaaagagcctcgccgagctggccgccgacggtgaggtcgaccccggctgggcc
gaggcgcttgcggatgcccagcccactctgaccgcgctcggcgagttcctgcgggccgag
cacgcggccggccgacagaccctccccgccgggccggacgtactgcgcgcattccggcga
ccgctggcagaggtgcgggtgctcatcgtcggtcaggacccctacccgacgcccggccac
ccgatcgggttgtccttcgcgacgtcccgcgcggtgcgcccgctgccacgcagcctcgcc
aacatctaccgcgaactgaacgacgatctcggcatcgcacccgcctcgcatggcgacctc
acctcgtggagcgagaacggcgtgctgctgctcaacagggtcctcaccgtcgacgccggc
gctcccggatcccatcgccgcaaagggtgggagcgggtcaccgagctcgccatccggagg
ctcgtcgaacgcggcggaccgctcgtcgcgatcctctggggcaacgacgcccagaccctg
aagcccatgctcggtgatgttcccgtgatcgcgtcggtgcatccgagcccgctgtcggcg
tcgcgcggattcttcggatcgcggccgttcagccgtgcgaacgcgctgctcgaggagcag
ggcgccgagccggtcgactggacggtgcgctga
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