Herbiconiux sp. L3-i23: L3i23_22260
Help
Entry
L3i23_22260 CDS
T08550
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03420
Nucleotide excision repair
heh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3i23_22260
03430 Mismatch repair
L3i23_22260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_22260
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i23_22260
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3i23_22260
MMR (mismatch excision repair)
Other MMR factors
L3i23_22260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDI23450
LinkDB
All DBs
Position
complement(2346459..2349644)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSPVLDAATIADALGQPRPTDQQAAVIEAPLVPSLVVAGAGSGKTETMAARVVYLLANSL
ARPNDILGLTFTRKAAGELAERVGKRIRALSASGLIDEPFDAFEAPTIATYNSFASSLFR
EHALGIGREPDATVLGEAAAWQLARRVVAASEDPELLPLGKSVDTITESVLALSAAMAEN
VVVDDELLRMTGRFEALANLPVGSNRVKSVYKSVADAVAAVGSLPVLVRLARTYSDEKIR
RGLIEFSDQVALALEVCTSLPEVAASYRERFPVVLLDEYQDTSVVQTRLLSTLFAPGAVM
AVGDPHQSIYGWRGASASNLGRFAGDFGGGEPTGSYALSTSWRNPPRVLAAANELVRPLS
AASVVEVDELHPREGAGEGSLDVGFDETVLDEAARVADWLATRVRPRRDRTLPSAAILCR
SLKKVAVFTKALAARGVRYRVLGIGGLLEEPAVADLVSVLHALDDPTSGRYLIRVLTGAR
HRIGVRDVKALRDVGGWLARRDIGHRPLADDVRQALRDAIGGDEGVSLIDALDFVAIAPE
GHIALREISPDGLIRMRALAAELAELRRRSGLALIDLVSLVIEQSGLDIESSANESATLG
RAALDSFLEVVEDFVSTDPAASLRSFLGWLQLAEQRENLGARAADPEPGTVQVLTIHGSK
GLEWDFVVVPRMVEGELPSPPRSKRGWLSFGELPYDFRGDRLDLPSLAWSSCETQRDFDE
AHKRYTDEVVRRDADEQRRLAYVAVTRAREALLLTGSFWSTQRKPRGPGRFLLDLRDAGL
IAADALPDAPENEENPLDAMTDHVPWPTDPLGARRDRVEAAAEAVRVADPSATTRWTRQL
DLLLAERDALRAAPAPPLPVRISASAFKDHVTDPDGVARALRRPMPQRPYRQTRLGTLFH
SWVEHRSGVAGSGDLVDAFADELDIDLADGDLDRSQLAVLQASFEASEWAGLAPEAVELE
VHLPFDDRIVICKLDAVYRRDGRYEVVDWKTGRPPKDAADLEQKTYQLALYRLAFAQWKG
VDPSEVDAAFYFVADDRVIRPDTFPSYDDLLTRWRETHPGG
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgtgctcgacgcggcgaccatcgccgacgccctcggacagccgcgacccacc
gaccagcaggcggcggtcatcgaagcgcctctggtgccgagcctcgtcgtcgcgggcgcc
ggcagcggcaagaccgagacgatggccgcgcgagtggtctacctcctggcgaactcgttg
gcccgaccgaacgacatcctcgggctgaccttcacccgcaaagcggccggtgagctcgcg
gagcgggtcggcaagcgcatccgcgcgctgtcggcgagcggactgatcgacgagccgttc
gacgcgttcgaggcgccgacgatcgccacctacaactcattcgcgagctccctcttccgc
gagcacgccctcggcatcggccgcgaacccgacgcgacggtgctcggtgaggccgctgcc
tggcagttggcgaggcgcgtcgtcgccgcatccgaggaccccgaactgctgccgctcggc
aagtcggtcgacaccatcaccgagtcggtgctcgcgctcagcgccgcgatggccgagaac
gtggtcgtcgacgacgagctgctgcgcatgaccggtcgttttgaagccctcgcgaacctg
ccggtcggcagcaaccgggtgaagtcggtctacaagtccgtcgccgacgcggtcgccgcg
gtcggatcgctgccggtgctggtgcggctcgcgcgaacctactccgacgagaagatccgc
cgggggctcatcgagttctccgaccaggtcgccctcgcgctcgaggtctgcacgagcctg
cccgaggtcgccgcgtcctaccgcgaacgcttccccgtcgtgctcctcgacgagtatcag
gacacgagcgtcgtgcagacgcggctcctgtcgacgctgttcgcccctggtgcggtgatg
gcggtcggagacccgcaccagtcgatctacggctggcgcggcgcgagcgccagcaacctg
ggtcgtttcgccggggacttcggcggcggtgaacccaccggctcctacgcgctgtcgacg
agctggcgcaacccgccgcgggtgctggccgccgcgaacgagctcgtgcgcccgctgtcc
gccgcatcggtcgtcgaggtcgacgaactgcacccccgagagggcgcgggcgaggggagc
ctcgacgtcggcttcgacgagaccgtcctcgacgaggcggcccgcgtcgccgactggctg
gcgacccgcgtgcgtccgcgacgggacaggaccctgccgtcggcggcgatcctctgccgc
tcgttgaagaaggtcgccgtgttcaccaaggcgctcgccgcccgcggtgtgcggtaccgg
gtgctcggcatcggcgggctgctcgaggagcccgcggtggcggacctcgtgagtgtgctg
cacgccctcgacgacccgacctccggtcggtacctcatccgcgttctcaccggagcccgg
caccgcatcggcgtgcgcgacgtgaaggcgctgcgcgacgtcggcgggtggctcgcccgc
cgcgacatcggtcaccggcccctcgccgacgacgtgcgccaggcactccgcgacgccatc
ggtggcgacgagggcgtctcgctcatcgacgcgctcgacttcgtggccatcgctcccgag
gggcacatcgcgctgcgggagatcagccctgacggcctgattcggatgcgcgcgctcgcc
gcggaactcgccgagctgcgccgacgcagcgggctcgccctcatcgacctggtctccctc
gtcatcgagcagagcggactcgacatcgagtcgagcgcgaacgagtcggcgacgctcgga
cgcgccgcgctcgactcgttcctcgaagtcgtcgaggacttcgtgtcgaccgatcccgca
gcgtcgctgcggtcgttcctcggatggctccagctggccgagcagcgcgagaacctcggc
gcccgcgccgccgaccccgagcccggcaccgtgcaggttctcacgatccacggatcgaag
ggtctcgaatgggacttcgtcgtcgtgccgcgcatggtcgagggcgagctgccgtcaccg
ccgcgcagcaagcgcggctggttgagcttcggcgagctgccctacgacttccgcggcgac
cgtctcgacctgccgagcctcgcctggtcgtcgtgcgagacgcagcgcgacttcgatgag
gcgcacaagcgctacaccgacgaggtggtgcgccgcgacgccgacgagcaacggcgcctc
gcctatgtggcggtcacgcgagcgcgggaagccctgctgctgacgggatcgttctggagc
acgcagcgcaaaccgcgggggcctggccggttcctcctcgacctccgtgacgccggtctg
atcgcggcggacgccctccccgacgcgcccgagaacgaggagaaccccctcgacgcgatg
accgaccacgtgccgtggccgacggacccgctcggcgcacgccgcgaccgggtcgaggcc
gccgccgaagccgtccgcgtcgccgacccgtcggcgacgacgagatggactcgtcagctc
gatctgcttctcgccgagcgggacgccctgcgtgccgctccggcgccgccactgccggtg
cgcatctcggcgtcggcgttcaaggaccacgttaccgaccccgacggcgtcgcacgggcg
ctccgacgaccgatgccgcagcggccgtaccggcagacccgcctcgggacgctgttccac
tcgtgggtcgagcaccggtccggcgtcgcggggtccggtgacctggtggacgccttcgcc
gacgagctcgacatcgacctcgccgacggcgacctcgaccggtcgcagctcgcggtgctg
caggcgtcgttcgaggcgtccgaatgggcggggctcgcgcccgaggcggtcgagctcgag
gtgcatcttccgttcgacgatcgcatcgtgatctgcaagctcgacgccgtgtaccgccgt
gacggacggtacgaggtcgtcgactggaagacgggccgcccgccgaaggacgcggccgat
ctggagcagaagacgtaccagttggcgttgtaccgtctcgcgttcgcgcagtggaagggc
gtcgacccgtccgaggtcgatgccgcgttctacttcgtcgccgacgatcgcgtcatccgc
ccggacaccttcccgtcctacgacgacctcctcacccgctggagggagacccacccgggc
ggttga
DBGET
integrated database retrieval system
