Herbiconiux sp. L3-i23: L3i23_22870
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Entry
L3i23_22870 CDS
T08550
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh00260
Glycine, serine and threonine metabolism
heh00630
Glyoxylate and dicarboxylate metabolism
heh00670
One carbon pool by folate
heh00785
Lipoic acid metabolism
heh01100
Metabolic pathways
heh01110
Biosynthesis of secondary metabolites
heh01200
Carbon metabolism
Module
heh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L3i23_22870 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L3i23_22870 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
L3i23_22870 (gcvP)
00670 One carbon pool by folate
L3i23_22870 (gcvP)
Enzymes [BR:
heh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
L3i23_22870 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF5813
Motif
Other DBs
NCBI-ProteinID:
BDI23511
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Position
complement(2418947..2421871)
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AA seq
974 aa
AA seq
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MSVTDTLSIPSVATVAGGAFTRRHIGTGADAQGVMLDSVGYPSVDALMDAAVPAGIRVDR
SLVSSIPDAATEAEALRELRMLAGRNTVRRSMIGLGYYGTLTPAVIKRNVLENPSWYTAY
TPYQPEISQGRLEALINFQTMVADLTGLATANASMLDEATAVVEGMLLARRASKSKSPRF
VVDADVFPQTLALLRHRAEAVGIEIVEAALAGGAAVDGEYFGLFVQYPGASGRLWNPAVT
IAAAKEAGAVAVVAADLLALTLVTSPGELGADVAVGTSQRFGVPMGFGGPHAGYMAVRAG
LERQLPGRLVGVSQDAAGQPAYRLSLQAREQHIRREKATSNICTAQVLLAVMAGMYAVYH
GPGGLTHIARTVHDRAFAAAKSLRSAGVEVVEGDFFDTFLVRVPDADVVLERARERGTLL
RRVDDTTVGVSFDEVTAGEVSLGAVSLLEIFAPDVDVIENVSAYGELPADLVRTSRFLTH
PVFNTHHSETSMMRYLRYLASLDYALDRGMIPLGSCTMKLNAAAEMEAVTWPEFAGLHPF
APAEDVRGYLDLIGQLEGWLAEVTGYDSVSLQPNAGSQGELAGLLAIRGYHRSRGDFERV
VCLIPSSAHGTNAASAVLAGMKVVVVACDSLGNVDLDDLRAKIEEHAATLAALMITYPST
HGVYEHEVQAITDAVHEAGGQVYVDGANLNALLGYARFGDFGGDVSHLNLHKTFCIPHGG
GGPGVGPVAAKAHLAPFLPGHPFSQRGGAEFAGGPVSAAPFGSPSILPISWAYVRMMGAD
GLRDATGAAVLAANYIAARLADHFPVLYKGDDGLVAHECILDLRPLTAATGVSVDDVAKR
LIDYGFHAPTMSFPVPGTLMVEPTESEDLAEIDRFVDAMIAIKAEADRVGSGEWDVDDNP
LRGAPHTAQAIAVADWPHAYSREDAVYPFAGASVDPATTTARIRGKYWPPVRRIDQAYGD
RNLVCACPPPEAFA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgacggacaccctctccatcccgtccgtcgccaccgtcgcgggcggcgcgttc
acccgccgccacatcggcaccggagccgacgcgcagggcgtcatgctcgactcggtcggc
tacccgagcgtcgatgcgctcatggacgcggccgtgcccgccggcatccgtgtcgaccgg
tcgctcgtgtcatccatccccgacgccgccaccgaagccgaggcgctgcgcgagctgcgg
atgctcgccggccgcaacaccgtgcgccgctcgatgatcggcctcggctactacggcacg
ctgaccccggccgtcatcaagcgcaacgtgctcgagaaccccagctggtacaccgcgtac
acgccgtaccagcccgagatctcgcaggggcgcctcgaagcgctcatcaatttccagacc
atggtcgccgacctgaccggcctcgcgaccgccaatgcgtcgatgctcgacgaggccacc
gctgtggtcgaaggaatgcttctcgcgcgccgggcgtcgaagtcgaagtctccgcggttc
gtcgtcgacgcggatgtgttcccgcagacgctcgcgctgctgcggcaccgtgccgaggcc
gtcggaatcgagatcgtcgaagcggcgctcgccggcggagcagcggtcgacggcgagtac
ttcggactgttcgtgcagtatccgggcgcctccgggcggctgtggaaccccgccgtgacc
atcgcggcagcgaaggaggccggcgccgtcgcggtcgtcgccgccgacctgctcgccctc
accctcgtgacctcgcccggcgagctcggcgcggatgtcgccgtcggcacgtcgcagcgc
ttcggggtgccgatgggcttcggaggaccgcacgccggatacatggcggtgcgcgccggc
ctcgaacgccagcttcccggtcgcctcgtcggagtcagccaggacgctgccggtcagccc
gcctaccgcctgtcgttgcaggcgcgcgagcagcacatccgtcgcgaaaaggccacgagc
aacatctgcacggcgcaggtgctgctcgccgtgatggccggcatgtacgccgtctaccac
ggccccggtggcctcacccacatcgcccgcacggtgcacgaccgcgcgttcgccgcggcg
aagtcgctgcgctccgccggcgtcgaagtggtcgaaggcgacttcttcgacaccttcctc
gtgcgcgtccccgatgccgacgtggtgctcgagcgggcccgcgagcgcggcaccctgctc
cgccgtgtcgacgacaccaccgtgggcgtcagcttcgacgaggtcaccgcgggcgaggtc
tcgctcggcgcggtgtcgctgctcgagatcttcgcccccgacgtcgacgtgatcgagaac
gtctccgcgtacggcgagctgcccgcggatctcgtgcgcaccagccgcttcctcacgcat
ccggtgttcaacacccaccattccgagacatccatgatgcggtacctgcgctacctcgcg
agcctcgactacgcactcgaccgcggcatgatcccgctcggctcgtgcaccatgaagctc
aacgcggccgctgagatggaggccgtcacctggcccgagttcgccggcctgcacccgttc
gctcccgccgaggacgtccgcggctacctcgacctcatcggccagctcgaggggtggttg
gccgaggtcaccggctacgactcggtctcgctgcagcccaacgccggcagccaaggcgaa
ctcgcggggctcctcgccatccgcggctaccaccggtcgcgcggcgacttcgagcgggtc
gtctgcctcatcccgtcgagcgcgcacggcacgaacgccgcctccgcggtgctcgcgggg
atgaaggtcgtcgtcgtcgcgtgcgacagcctcggcaacgtcgacctcgacgacctccgc
gcgaagatcgaggagcacgccgccacgctcgcggcgctcatgatcacctacccgtcgacg
cacggcgtgtacgagcacgaggtccaggccatcaccgacgccgtccacgaggccggcggc
caggtctacgtcgacggtgcgaacctcaacgcccttctcgggtacgcgcggttcggtgac
ttcggcggcgacgtctcgcacctcaacctgcacaagaccttctgcatcccgcacggcgga
ggcggacccggcgtcggcccggtcgccgcgaaggcgcacctcgcgcccttcctgccaggg
cacccgttctcgcagcgcgggggtgccgagttcgccgggggtccggtgtcggccgcgccg
ttcgggtcgccgtcgatcctgccgatcagttgggcctacgtccggatgatgggggccgac
ggcctgcgcgacgcgaccggtgccgcggtgctcgccgcgaactacatcgcggcgaggctc
gccgaccacttcccggtgctgtacaagggcgacgacggactcgtggcccacgagtgcatc
ctggacctgcggccgctgaccgcggcgaccggggtgagcgtcgacgacgtcgcgaagcgg
ctcatcgactacggattccatgcgccgaccatgtcgttcccggtgcccggcaccctcatg
gtcgagccgaccgagagcgaggacctcgccgagatcgaccggttcgtcgacgcgatgatc
gcgatcaaggccgaagccgaccgggtcgggtcgggggagtgggatgtcgacgacaacccg
ctgcgcggcgccccgcacacggctcaggccatcgcggtcgccgactggccgcacgcctac
tcgcgggaggacgcggtctacccgttcgccggcgcgagcgtggacccggcgaccacgacg
gcgcgcattcgcggcaagtactggccgcctgtgcgtcgcatcgaccaggcgtacggcgat
cgcaacctggtctgcgcgtgcccgcccccggaggccttcgcctga
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