Herbiconiux sp. L3-i23: L3i23_23530
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Entry
L3i23_23530 CDS
T08550
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3i23_23530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
heh02000
]
L3i23_23530
Transporters [BR:
heh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
L3i23_23530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
AAA_22
CysA_C_terminal
SMC_N
AAA_28
ABC_ATPase
AAA_25
AAA
SRP54
ORC-CDC6-like
RsgA_GTPase
AAA_33
AAA_18
NACHT
nSTAND_NTPase5
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BDI23577
LinkDB
All DBs
Position
complement(2479629..2480699)
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AA seq
356 aa
AA seq
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MTTLTPTPSAAPSQSRSAAVELRGVVKTYGAARALDGIDLRLAPGEFIALLGPSGCGKTT
ALRSLAGLERIDSGEILIDGDDVARIPTNKRDMGMVFQSYSLFPHMTSIANVEYGLRMRK
VASAERRQRALEALELVGLGDKGERFAHQLSGGQQQRVALARALVTRPRVLLLDEPLSAL
DAKVRVQLREQIRLIQLELGITTLFVTHDQEEALAVADRVAVMNAGRIEQLGAPEELYSR
PATAFVADFVGTSNRIPGIVDGGRVELLGETLPLIDPTEPNGPVLASVRPEDLLLGSTGW
NGTVVASSFLGSSRRTTVAVVGGVELVVQHDVAVSPAVGESVRVALRGTPVAVRPA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactctcactcccaccccttcggccgcgccgtcgcagagccgctctgccgccgtc
gagctgcgcggcgtcgtcaagacctacggcgcagctcgtgcgctcgacgggatcgacctc
cggctggcccccggcgagttcatcgccctgctcggcccctccggctgcggcaagacgacc
gcgctgcgcagcctcgccgggctcgagcgcatcgactcgggcgagatcctcatcgacggc
gacgatgtggcgcgcatccccacgaacaagcgcgacatgggcatggtcttccagtcgtac
tcgctgttcccgcacatgacctcgattgcgaacgtcgagtacgggctgcggatgcgcaag
gtcgcctcggccgagcgacgtcagcgcgcgctcgaggcgctcgaactggtcggcctcggc
gacaagggggagcggttcgcgcaccagctctcgggcgggcagcagcagcgcgtcgctctc
gcccgcgccctggtgacccgtccccgcgtgctcctgctcgacgaaccgctgtcggcgctc
gacgcgaaggtgcgcgtgcagctgcgcgaacagatccgcctcatccagctcgagctcggc
atcaccaccctcttcgtcacccacgaccaggaggaggcgctcgccgtcgccgaccgggtc
gccgtcatgaacgcgggccgcatcgagcagctcggtgccccggaagagctgtactcgcgg
ccggcgaccgcgttcgtcgccgacttcgtgggcaccagcaaccgcatccccggcatcgtc
gacggcggccgggtcgaactgctgggcgagaccctgccgctcatcgaccccaccgagccg
aacgggcccgtgctcgcgagcgtccgacccgaggatctgctgctcggctcgaccggctgg
aacggtaccgtcgtcgcgagcagcttcctcggatcgtcgcggcggacgaccgtcgcggtg
gtcggcggggtcgaactggtggtgcagcacgacgtcgccgtgtcgcccgcggtcggggag
tcggtgcgggtcgcgctgcgcggcacccctgtggcggtgcgccccgcgtaa
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