Herbiconiux sp. L3-i23: L3i23_23560
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Entry
L3i23_23560 CDS
T08550
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3i23_23560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
heh02000
]
L3i23_23560
Transporters [BR:
heh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
L3i23_23560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BDI23580
LinkDB
All DBs
Position
complement(2482460..2483590)
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AA seq
376 aa
AA seq
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MKSMRTALASLAVLGVAGLTLAGCSATPAEGTDGTAAATATSLADFGDMAALEEAAKAEG
ALNVIALPRNWANYGEILDLFAEKYPEITINEANPDGSSQDEIDAATNLEGQDTAPDVFD
LGAAVALANTDMFAPYQVETWDDIPDALKEQSGLWVGDYGGYMSIGYDPDAVPAPESLED
LLGAEYAGKVALNGDPTQAGSAFAAVGLASVQNGGSVDDFQPGIDFFSELNAAGNFLKVD
PDTSTITSGETPVVFDWDYLNAGLTAELEGQRNWEVVVLPGTGYAGYYNQAINKNAPHPA
AARLWQEFLYSDEVQNLWLKGGARPVRAEAMVEAGTIDSDLYDALPEVPEETVVPTQEQS
EAAATLLGENWASAVQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagcatgcgcaccgcgctcgcttctctcgccgtcctcggtgtcgccggcctgacc
ctcgccggctgctcggcgaccccggccgaaggcaccgacggaaccgccgcggcgacggcc
accagcctcgccgacttcggcgacatggccgccctcgaagaggccgccaaggccgaaggc
gcgctcaacgtcatcgcgctgccccgcaactgggcgaactacggcgagatcctcgacctg
ttcgccgagaagtaccccgagatcaccatcaacgaggcgaaccccgacgggtcgagccag
gacgagatcgacgccgccaccaacctcgagggccaggacaccgcgcccgacgtgttcgac
ctcggcgccgccgtcgcgctcgccaacaccgacatgttcgcgccgtaccaggtagagacc
tgggacgacatccccgacgccctcaaggagcagtcgggcctctgggtcggcgactacggc
ggctacatgtcgatcggctacgaccccgacgccgtgccggcccccgagtcgctcgaggac
ctcctcggcgccgagtacgcgggcaaggtcgcgctgaacggcgacccgacccaggccggc
tccgccttcgcagccgtcggcctcgcgtcggtgcagaacggtggatcggtcgacgacttc
cagcccggaatcgacttcttcagcgagctgaacgccgcgggcaacttcctgaaggtcgac
cccgacacctcgacgatcacctcgggtgagacccccgtcgtgttcgactgggactacctg
aacgccggtctcacggccgagctcgagggtcagcgcaactgggaggtcgtggtcctgccc
ggcaccggttacgccggctactacaaccaggccatcaacaagaacgccccgcaccccgcg
gccgcgcgtctctggcaggagttcctctacagcgatgaggtgcagaacctctggctgaag
ggtggcgcccgtcccgtccgcgccgaggccatggtcgaggccggcacgatcgactccgac
ctctacgacgcgctccccgaggttcccgaggagaccgtcgtccccacccaggagcagtcc
gaggcggccgcaacgctgctcggcgagaactgggcctcggccgttcagtaa
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