Herbiconiux sp. L3-i23: L3i23_25770
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Entry
L3i23_25770 CDS
T08550
Symbol
sucD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh00020
Citrate cycle (TCA cycle)
heh00640
Propanoate metabolism
heh00660
C5-Branched dibasic acid metabolism
heh00720
Other carbon fixation pathways
heh01100
Metabolic pathways
heh01110
Biosynthesis of secondary metabolites
heh01120
Microbial metabolism in diverse environments
heh01200
Carbon metabolism
Module
heh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
heh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L3i23_25770 (sucD)
00640 Propanoate metabolism
L3i23_25770 (sucD)
00660 C5-Branched dibasic acid metabolism
L3i23_25770 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
L3i23_25770 (sucD)
Enzymes [BR:
heh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
L3i23_25770 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
BDI23801
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All DBs
Position
complement(2718397..2719284)
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AA seq
295 aa
AA seq
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MSILLDENSKIIVQGLTGSEGTKHAGRMLKSGAQIVGGVNPRKAGTEVEIEGVTLPIFGS
VNEAIARTGANVSVIFVPPAFAKAAVVEAVDAEIPLAVVITEGIPVKDSAEFWSHAKTKG
GRTRIIGPNCPGVISPGKSNAGIIPATITGPGPIGLVSKSGTLTYQMMFELRDIGISTAV
GIGGDPIIGTTHIDALAAFEADPETTAIVMIGEIGGDAEERAAEFIKANVTKPVVAYVAG
FTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAALMREVFASA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccttctcgatgagaactccaagatcatcgtccagggcctgaccggctccgag
ggcaccaagcacgccgggcgcatgctcaagtcgggcgcacagatcgtcggcggcgtgaac
ccgcgcaaggcgggcaccgaggtcgagatcgagggcgtgacgctgccgatcttcggctcc
gtcaacgaggcgatcgcccgcaccggcgcgaacgtctcggtcatcttcgtcccgccggcg
ttcgcgaaggccgcggtcgtcgaggccgtcgacgccgagatcccgctcgccgtcgtcatc
accgagggcatcccggtgaaggactcggccgagttctggtcgcacgccaagaccaagggc
ggccgtacccgcatcatcgggccgaactgccccggcgtgatcagccccggcaagtccaac
gccggcatcatccccgccacgatcaccggccccggcccgatcgggctcgtgtcgaagtcg
ggcaccctgacgtaccagatgatgttcgagctgcgcgacatcggcatctcgaccgcggtc
ggcatcggcggcgacccgatcatcggcaccacccacatcgacgcgctcgccgcgttcgag
gccgaccccgagacgacggcgatcgtgatgatcggcgagatcggcggcgacgccgaagag
cgcgcggccgagttcatcaaggcgaacgtcaccaagccggtcgtcgcctacgtcgcgggc
ttcaccgcccccgagggcaagaccatgggtcacgcgggcgccatcgtgtccggctcgtcg
ggtaccgcccaggcgaagaaggaggccctcgaggccgccggcgtcaaggtcggcaagacc
ccgagtgagaccgccgcgctcatgcgcgaggtcttcgcctccgcgtga
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