Herbiconiux sp. L3-i23: L3i23_26370
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Entry
L3i23_26370 CDS
T08550
Name
(GenBank) transcriptional antiterminator
Organism
heh
Herbiconiux sp. L3-i23
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Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
HTH_11
Mga
MerR
HTH_IclR
HTH_24
HTH_DeoR
HTH_Mga
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BDI23861
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Position
2775353..2777266
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AA seq
637 aa
AA seq
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MADKIPQLLEHLSRSDGWVSAGELADRIGVSTRTVRSYVTAVKTAASPLEVIASSTSGYR
LNPDEYARYLADGPDAEASPERPRERANYLITRLAQASDGLDVYGLAAALFVSDSTLEAD
LRRVRAVARDCGVELVREGSVVRLAGAEDTLRRLMSQVFREETARGPLGLRQVQDAFGIG
DLSGFKTDLVSLLQDEGYAVNEFGLDGVLVHTAIALERSRTGHARTEPAAGTDDLEAALA
PLVVKHFGAELPPGELRALADLLTTRVGTRRPPAGRDGDDDATARVPADDLTFVRTLLER
AGKEFLVDLDDEGFLVRLTMHVGNLARRARSGGATRNPLTRSIKTSYPLTYELAVFLASE
IQRRYDITVSDDEIAFIALHVGAHLERNASPADAVSCTIVSPGYHDLGELLRKRLESAFG
SELRIERVIARTDPDPPELTSDLIVSSTPSIPRTENVVLVQPFPTDADVDAVRAALSRVR
RHRRRARLKDELLLYFDESLFLRDVSVPDPDTMIRALGERLMLLGVADQAYVDGVIERER
LSSTAFTEHLAVPHSMTMSASRTAIAIALNDTPMPWGDNRVNVVALAAFSDADRAAFQTV
FEQFVEVFANHADVQRLLRGSEDFRSFIDELVRLIDA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatcccgcagctcctcgagcacctcagccgaagcgacggctgggtgtcc
gcgggcgagctcgccgaccggatcggggtctccacccgcaccgtgcgcagctacgtgacg
gccgtgaagacggcggcgagcccgctcgaggtgatcgcctcgtcgacgagcgggtaccgg
ctcaaccccgacgagtacgcgcgctacctcgccgacggccccgacgcggaagcgtcgccc
gagcggccgcgggagcgggccaactacctcatcacccgtctcgcccaggcgagcgacggg
ctcgacgtctacggtctggcggcggcgctcttcgtgagcgactcgacgctcgaggccgac
ctgcgacgggtacgggcggtcgcgcgcgactgcggcgtcgagctggtgcgcgagggttcc
gtcgtccgactcgccggcgccgaggacaccctgcgccggctcatgagccaggtgttccga
gaggagaccgcacgcggccctctcgggttgcggcaggtgcaggacgcgttcgggatcggg
gacctctccggcttcaagaccgacctcgtttctctgctccaggacgagggctacgcggtc
aacgagttcgggctcgacggcgtgctcgtgcacaccgcgatcgcgctcgagcgctcccgc
accggccatgcacgcacggagcccgcggccggcaccgacgacctcgaagcggcgctcgct
ccgctcgtcgtcaagcacttcggcgccgagctgccgcccggggagctccgggccctcgcc
gatctgctcacgacccgcgtgggcacccgacgacctcccgccgggcgcgacggcgatgac
gacgccaccgctcgggtcccggccgacgacctcaccttcgtccgcaccctcctcgaacgt
gcggggaaggagttcctcgtcgacctcgacgacgagggcttcctcgtgcgactcaccatg
cacgtcggcaacctcgcacggcgcgcccgctccggcggggcgaccaggaacccgctcacg
cggtcgatcaagacctcgtacccgctgacgtacgagctcgccgtcttcctcgcgagcgag
atccagcgccgctacgacatcacggtgagcgacgacgagatcgcgttcatcgcgttgcac
gtcggcgcgcacctcgaacgcaacgcctcgccggccgacgcggtgtcgtgcacgatcgtc
agccccggctaccacgacctcggcgagctgctgcgcaaacgtctcgagagcgctttcggg
tcggagctgcgcatcgaacgcgtcatcgcgcgcaccgaccccgacccgcccgagctcacg
agcgacctcatcgtgtcgtccacgccgtcgatcccgcgcaccgagaacgtcgtgctcgtg
cagccgttccccaccgacgccgacgtcgacgccgtgcgcgccgccctgtcgcgggtccgg
cgccaccgccgacgtgcccggctgaaggacgagctgctgctctacttcgacgagtcgctg
ttcctccgcgacgtctcggtccccgacccggacaccatgatcagagcgctcggcgagcgg
ttgatgctgctcggggtggccgaccaggcgtacgtcgacggcgtcatcgagcgagagaga
ctctcgtcgaccgcgttcaccgagcacctcgcggtgccgcactcgatgacgatgagcgcc
tcacgcacggcgatcgcgatcgccctcaacgacaccccaatgccgtggggcgacaaccgc
gtgaacgtcgtcgcgctcgccgcgttcagcgacgcggaccgcgccgcgttccagaccgtg
ttcgagcagttcgtcgaggtcttcgccaaccacgcggatgtgcagcggctgctgcgcggc
tccgaggacttccgctcgttcatcgacgagctcgtccgcctcatcgacgcctga
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