Herbiconiux sp. L3-i23: L3i23_26770
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Entry
L3i23_26770 CDS
T08550
Symbol
topA_2
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_26770 (topA_2)
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_26770 (topA_2)
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L3i23_26770 (topA_2)
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Topoisomerases
L3i23_26770 (topA_2)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3i23_26770 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
BDI23901
LinkDB
All DBs
Position
complement(2812141..2813106)
Genome browser
AA seq
321 aa
AA seq
DB search
MRLRRTNATGHGYLRVRAGTGFSYRSTKDGLLADDELRSRFEALGIPPAWEQVWICPFEN
GHIQAIGYDAAGRKQYIYHPTWREKKDRVKYDRAMELAESLPSARRRVTMDLRSDGYTRE
RVLAAAFRMLDTGSLRVGSERYAESNGSHGLTTLLCSHASVRKDTVELKFPAKSHKAWES
DIRDADLAVLVRALKRRGPNARLLAYKDGRAWHPVAAAEVNEYVRERTGGEFTAKDFRTL
HGTVTAAVSLAKHGPEDTKTARQRAVAQAMRDASVVLSNTPTIARASYVDPRIVDRYHSG
ETIDPARTASAESEVRALLYG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctccgccgcaccaacgcgaccggtcacggatacctgcgcgtccgagcgggcacc
ggcttctcctaccgctcgaccaaggacggcctgctcgccgacgacgagctgcgctcccgg
ttcgaggcgctcggcatcccgcccgcgtgggagcaggtgtggatctgcccgttcgagaac
ggccacatccaggcgatcggctacgacgccgcgggacgaaagcagtacatctaccacccc
acctggcgcgagaagaaggaccgggtcaagtacgaccgggcgatggagctcgccgagtcg
ctgccgtcggcgaggcgccgggtgacgatggacctgcgctccgacgggtacacccgcgag
cgggtgctcgcggcggcgttccggatgctcgacaccgggtcgctgcgggtcggctccgaa
cgctacgccgaatcgaacggcagccacgggctgacgaccctgctgtgctcccatgccagc
gtgcggaaggacacggtggagctgaagttccccgccaagagccacaaggcttgggaatcc
gacatccgcgacgccgacctcgccgtgctcgtccgagcgttgaagcgccgcggaccgaac
gcgcgtctgctcgcctacaaggacggccgcgcctggcatccggtcgcggcggccgaggtc
aacgagtacgtgcgcgaacgcaccggcggcgaattcaccgcgaaggacttccgcaccctc
cacggcaccgtcaccgcggcggtcagtctcgccaagcacggccccgaggacacgaagacg
gcgcggcagcgagcggtcgcgcaggcgatgcgggacgcctccgtggtgctgagcaacacc
ccgaccatcgcgcgggcgagctacgtcgacccgcgcatcgtcgaccggtaccactccggc
gagaccatcgacccggcgcggaccgcgtcagccgaaagcgaagtccgcgcgctgctgtac
ggctga
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integrated database retrieval system
