Herbiconiux sp. L3-i23: L3i23_27780
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Entry
L3i23_27780 CDS
T08550
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3i23_27780 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
heh03019
]
L3i23_27780 (recQ_2)
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_27780 (recQ_2)
Enzymes [BR:
heh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i23_27780 (recQ_2)
Messenger RNA biogenesis [BR:
heh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3i23_27780 (recQ_2)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3i23_27780 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BDI24002
LinkDB
All DBs
Position
complement(2928477..2930318)
Genome browser
AA seq
613 aa
AA seq
DB search
MAAALTLESGLATLRSTFGYDEFRGQQGAIVEHVLGGGDAIVLMPTGGGKSLCYQIPALA
RPGTGVVVSPLIALMHDQVEALRAVGARAEFLNSTQDSGERARVEQALLAGEVDLLYVAP
ERLALESTRRLLDSVHRGPGLSVLAIDEAHCVAQWGHDFRPDYLTLGDLGERWPDVPRLA
LTATATEATHRELTHRLQLDGAKHFVSSFDRPNIQYRIVPKDEPRKQLLSFLRSEHSGDA
GIVYALSRNSVEQTAEFLASNGIAALPYHAGLDARVRAVNQSRFLREDGIVMVATIAFGM
GIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIESSEGD
AAHRRRLSANLDAMLALCETVDCRRRQVLAYFGEERAEACGNCDTCLEKPETWDGTVPAQ
KFLSTVVRLQRERGQRFGGGQIVDILRGKQTARTLQHRHEQLATWGIGADLSDQQWRGVL
RQLLAQGLLSVADDGYGTLVLSETSGDVLSGKRRVAMRKDTARAGRSSGSSSARRAVVEL
PPEAQPLFEELREWRAAEAKEQGVPAYVVFNDASLRELATVRPTSMKNLAGITGVGQAKL
DRYGEKLLAVITG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccgctctgaccctcgaatccggactcgccacactcaggtccacgttcggctac
gacgagttccgaggccagcagggcgcgatcgtcgagcacgtgctgggtggcggcgacgcc
atcgtgctcatgccgaccggcggcggcaagtcgctgtgctaccagatccccgcactcgcg
aggcccggcacgggtgtggtggtatcaccgctcatcgccctcatgcacgaccaggtcgag
gcgctgcgtgccgtcggtgcgcgggccgagttcctcaactccacacaggactcgggcgag
cgcgcccgggtcgagcaggcgctgctcgccggcgaggtcgacctgctctacgtggctccc
gagcgactcgctctcgagagcacccgccgactgctcgactcggtgcaccgcgggccaggg
ctctcggtgctcgccatcgatgaggcgcactgcgtggcgcagtggggtcacgacttccgt
cccgactacctgaccctcggcgatctcggcgagcgctggcccgatgtgccgcgcctcgcc
ctcacggcgaccgcgacagaggccacgcaccgcgagctcacccatcggttgcagctcgac
ggcgcgaagcacttcgtctcgagcttcgaccgtccgaacatccagtaccgcatcgtgccg
aaggacgagccccgcaagcagctgctctccttcctgcgcagcgagcactccggcgatgcg
ggcatcgtttacgcgctctcccgcaacagcgtcgagcagaccgccgagttcctcgcgtcg
aacggcatcgccgcgctgccgtaccacgccggcctcgacgcccgggtgcgcgccgtgaac
cagagccggttcctccgcgaggacggcatcgtcatggtggcgacgatcgcgttcggcatg
ggcatcgacaagcccgatgtccgcttcgtcgcccacatcgacctgcccaagtcggtcgag
ggctactaccaggagaccggccgcgcgggccgagacggtctgccgtcgaccgcctggctc
gcctacgggcttcaggacgtggtgcagcagcgccgcatgatcgagagctccgagggcgac
gccgcccaccgtcgccgactgtccgcgaatctcgatgcgatgctcgcgctctgcgagacc
gtcgactgccgccgccgtcaggtgctcgcctacttcggcgaggagcgagccgaagcgtgc
ggcaactgcgacacctgcctcgagaagcccgagacctgggacggcacggtgccggcgcag
aagttcctctccaccgtcgtgcgcctgcagcgcgagcgggggcagcgcttcggtggaggc
cagatcgtcgacatcctccgcggtaagcagaccgcccgcaccctgcagcaccgccacgag
cagctcgccacgtggggcatcggcgccgatctcagcgaccagcagtggcgcggggtgctg
cgccagctcctcgcgcaggggctgctctcggtcgcggacgacggctacggcaccctcgtc
ctctccgagacgagcggcgatgtgctctcgggcaagcggcgagtggcgatgcggaaggac
acggcgagggcgggacgatcgagcggctcgagcagtgcccggcgcgcggtcgtcgagttg
ccgcccgaggcgcagccgctcttcgaggagctccgcgaatggcgtgccgccgaggccaag
gagcagggagtgccggcgtacgtcgtcttcaacgacgcgtcgttgcgcgagttggccacg
gtccggccgaccagcatgaagaacctcgccggcatcactggtgtcggccaggcgaagctc
gaccgctacggcgagaagctcctcgccgtgatcacgggctga
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