Herbiconiux sp. L3-i23: L3i23_29450
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Entry
L3i23_29450 CDS
T08550
Symbol
hup1
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
heh
Herbiconiux sp. L3-i23
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heh03032
]
L3i23_29450 (hup1)
03036 Chromosome and associated proteins [BR:
heh03036
]
L3i23_29450 (hup1)
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_29450 (hup1)
DNA replication proteins [BR:
heh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L3i23_29450 (hup1)
Chromosome and associated proteins [BR:
heh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L3i23_29450 (hup1)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L3i23_29450 (hup1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PSF3_N
HU-CCDC81_euk_2
DUF2267
RAB3GAP2_N
Motif
Other DBs
NCBI-ProteinID:
BDI24169
LinkDB
All DBs
Position
complement(3104089..3104373)
Genome browser
AA seq
94 aa
AA seq
DB search
MASLNRTDLVAAVAAESGQSQASVNGVLDALFSTLAKSVAEGTKVTIPGWLAVEQTARAA
RTGRNPQTGEPIEIAASKGVKISAGSKLKAAVKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgaaccgcactgacctggtcgctgcagtcgctgccgagtctggccagagc
caggcttcggtcaacggagtgctcgacgctctcttctcgaccctcgccaagtcggtggcc
gagggcaccaaggtgacgatcccgggttggctcgcagtcgagcagaccgcccgcgccgcg
cgcaccggccgcaaccctcagaccggcgagccgatcgagatcgccgcgagcaagggcgtc
aagatcagcgccggcagcaagctgaaggccgccgtcaagtcctag
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