Helicobacter pylori Rif2: C730_01830
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Entry
C730_01830 CDS
T02318
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hei
Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hei03016
]
C730_01830 (truA)
Enzymes [BR:
hei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C730_01830 (truA)
Transfer RNA biogenesis [BR:
hei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C730_01830 (truA)
Prokaryotic type
C730_01830 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF5534
Motif
Other DBs
NCBI-ProteinID:
AFV44769
LinkDB
All DBs
Position
complement(371193..371921)
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AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIEDALNALGIKSVVIAAGRTDKGVHANNQV
LSFHAPKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFIIGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaactcggcgttcaagacaaaatagaggacgctttaaatgcattagggatt
aaaagcgttgtgattgcggccgggcgcacggataaaggcgtgcatgcgaacaaccaggtt
ttgtcttttcacgctccaaaacactggaacgccgctaaattattttattacctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccctatatcgcttgtggggattatggctcactagacgcattaaacaccgctttaaaa
caattcacaggcaagcatgatttttccatgtttaagaaagaaggcggggctacaaccaat
cctaaacgcactatttttaacgcttttgcttataaaacctttatcatagggcatgagtgc
gtggtgtttaaaatcattggcgatgcatttttacgctctagcgtgcgtttgatcattcaa
gcatgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcacaaatccat
aacctcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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