KEGG   Helicobacter pylori Rif2: C730_02345
Entry
C730_02345        CDS       T02318                                 
Name
(GenBank) protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hei  Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:hei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hei02044]
    C730_02345
Secretion system [BR:hei02044]
 Type IV secretion system
  DNA uptake competence system protein
   C730_02345
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 TraG-D_C Folliculin_C AAA_22 Zot AAA_29 PduV-EutP SAM_DrpA AAA_7 RsgA_GTPase MMR_HSR1 AAA_16 ABC_tran AAA_25 Sporozoite_P67 RNA_helicase
Other DBs
NCBI-ProteinID: AFV44861
LinkDB
Position
476343..478919
AA seq 858 aa
MLESALKYCKEKAIDLLVGFVPKTYSMAQECNILGLYDDAFIITKQENLVGIISLQGLSY
SNLMQKDLEGYFDARQNVLNTISKDIQLRIVAKRRKEFINQSPNIDNIYAKAIITQFESK
GIYKTEYFLVFETITSNVKSFFEKKKLEMTTSINEELEESSKEDKQENENSSNETHSNTS
SKKDKKNKFKKKITFSTKSKRALLIQTIERVKNALKEFKPTLLNSKEVLNFYAEYINGKY
IAFNPKLKRLSDSYIASNVHFKKDYFVIEFQNQNTFCACVGIKAYESEEISSLPISTLLH
TQIELDLIFHIRSLGQFESLNFLKTKKKLTLSKIVKADIDNYIELVQANRLSMQECALNL
VIRAKSKAKLDKSLKEILSLLNNAGLGSVTETIGLKPSYFSFFPNNANINPRMRHQTSQV
IASLILFEKNNTGFRANSWGDMPLSVFKNLDHSPYLFNFHNQEVKHKGVLAHNVARVVGH
TMIIGATGAGKTTLISYLMMSALKYSNIDILALDRLNGLYSFTKYFDGIYNQGENFHINP
FSLEDSATNRAFLLHFYAQMAKVDSYDDHKDKVEDRTALLNAIDTMYRNYNDEVKQAKFS
NQELPLPFDLKEFVNAIAKTNTDILDSSFEDYLKSSLFSSRMDSLDFKTRISTINTDSIL
HNDDDAGLLAYYVFHKMIDRALKINRGFLCFIDEFKSYAQNEMMNKKINEIITQARKANG
VIVLALQDINQLSEVRNAQSFIKNMGQLILYPQRNIDTKDLNDKFGIRLSDTEKHFLENT
AVNEYKVLLKNMNDGSSNIIDVSLSSLGNYLQIFSSNSSMVEHIDNLIKHYPKTWREVFV
SNKHENFDDKKHLEKVLK
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgttagaaagcgcccttaaatattgcaaggaaaaagccatagaccttttagtagggttt
gtgccaaaaacctattctatggcacaagagtgcaatattttaggcttgtatgatgatgct
ttcattattaccaaacaagaaaatctagtaggcattatatccttacaaggactaagctat
tctaatttaatgcaaaaagacttagagggctattttgatgctagacaaaatgttctcaac
accattagtaaagacattcaattaagaattgtggctaaaaggcgtaaggaatttatcaat
caaagtccaaatattgacaatatttatgccaaagctattatcacacaatttgaaagcaag
ggaatctataaaacagagtattttttagtgtttgaaactatcacttctaatgtcaagtct
ttctttgaaaaaaagaaattggaaatgactacttcaattaatgaagagttagaagaaagc
tctaaagaagataaacaagagaatgaaaatagctccaatgaaactcattcaaacacaagc
tctaaaaaagacaagaaaaacaagttcaaaaaaaagataacctttagcaccaaaagtaaa
agagccttactcattcaaaccatagaaagagtaaaaaacgctcttaaagaatttaaaccc
actttactaaattctaaagaagtattaaatttctacgcagaatacatcaatggcaaatac
atcgcctttaatcctaaattaaagcgattaagcgatagctatattgcatctaatgtgcat
tttaagaaagattactttgtcattgaatttcaaaatcaaaacaccttttgtgcgtgtgtg
gggattaaggcttatgagagcgaagaaatttcttcgctccctatatctactcttttacac
acccaaattgaactagatttaatctttcatatccgctctttagggcaatttgaaagcctg
aattttttaaaaactaagaaaaagctcacgctttctaaaatagtaaaagctgatattgat
aattatatagaattagtgcaagccaatcgtttgagcatgcaagagtgtgctttaaactta
gttataagggctaaaagtaaagctaaattagacaagtctttaaaagagattttatccttg
cttaataatgctggactaggcagtgttacagaaactatagggctaaaaccatcttatttt
tcattcttcccaaataacgccaatatcaaccctagaatgagacatcaaacttcccaagtc
atagcatctttgattttgtttgagaaaaataatacaggttttagagcaaattcttggggg
gatatgcccttatctgtgtttaagaacctagaccatagcccttatttgtttaattttcat
aatcaagaagtcaaacataagggcgtgttagcccacaatgtcgcacgagtagtgggacat
accatgattataggagcaacaggtgctggtaaaaccacactcattagctatttgatgatg
agtgccttaaaatattctaacattgatattttagctcttgatagactaaatggtttgtat
tcctttaccaagtattttgatgggatttataatcaaggcgaaaactttcatattaaccct
ttttcattagaagatagcgcaactaatagagcctttttattgcatttttatgcccaaatg
gcaaaagtggatagttatgatgaccataaggataaagtagaagatagaacagccctttta
aatgctattgatacgatgtatagaaattataacgatgaagtcaaacaagccaaatttagc
aaccaagaattaccccttccttttgatttaaaagagtttgtcaatgccattgctaaaacc
aatacagacattttagatagtagttttgaagactatttaaaatcttccttattttctagc
cgaatggatagtctagattttaaaactcgtattagcaccataaataccgatagcatttta
cataatgatgatgacgctgggcttttagcctactatgtctttcataagatgattgacaga
gccttaaaaatcaatcgtgggtttttatgctttattgatgagtttaagtcttacgctcaa
aatgaaatgatgaataaaaaaatcaatgaaatcattactcaagctagaaaggctaatggg
gtgattgttctagccttacaagacattaaccaactaagcgaagtgagaaacgctcaaagc
tttataaaaaatatggggcaattgattttgtatccccaaagaaatattgataccaaagat
ttaaacgataaatttggcattagactaagcgatacagaaaaacattttttagaaaacacc
gccgttaatgaatacaaagtcttactcaaaaacatgaatgatggctcatctaacattata
gatgtgagcctaagttctttgggtaattacctacaaatctttagctctaattctagcatg
gtagaacacattgataatctcattaagcattaccctaaaacttggcgagaagtctttgtg
agtaacaaacacgaaaattttgatgacaaaaaacacttagaaaaggtgcttaaatga

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