KEGG   Helicobacter pylori Rif2: C730_02700
Entry
C730_02700        CDS       T02318                                 
Name
(GenBank) cag pathogenicity island protein Beta
  KO
K12090  cag pathogenicity island protein 5
Organism
hei  Helicobacter pylori Rif2
Module
hei_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hei02044]
    C730_02700
Secretion system [BR:hei02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   C730_02700
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind RIC3
Other DBs
NCBI-ProteinID: AFV44930
LinkDB
Position
complement(550225..552471)
AA seq 748 aa
MEDFLYNTLYFIEDYKLVVIFSFIGLIALFFLYKFIKAQKKAFKDKANQPQKKKSFKEII
IDGLKERVKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNRSPESDDDLFDIWIYAI
QDFPNYYFKALGFSSLKIYGFNISLVVYGSILCSYIFITFFVWFLKYLTRTRDIGANKKV
DDLFGSASWETEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPT
RSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNP
FAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFS
NQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNME
KVVSLMEFFGGEEDKSGDNLRVLSPATRNMWNSFKTMGGARETYSSVQGVYTSAFAPYNN
AMIRNFTSANDFDFRRLRIDEVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQ
CKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGRNGAKT
ILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLM
TPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQAT
FYDDLQAAKTRGELSYDKSLVPVGSSEL
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaagactttttgtataacaccttatatttcatagaggattataagttggttgttatt
tttagtttcatagggttaatagcgttattttttctttacaaattcataaaagctcaaaaa
aaggcttttaaagataaagctaaccagcctcaaaagaaaaaaagctttaaagaaatcatt
atagatgggctgaaagaaagggttaaaacctttggcttttggttgcaagctatactatta
ctatcctattcttttatcacatcaggattatttttcttgattctcttaggtaatttttat
gatgataatcgatcgcctgagagcgatgatgatctttttgatatatggatctatgcgata
caagattttcctaattactattttaaagcgcttggttttagttcactcaagatttatggg
ttcaatatatccttagtcgtatatggttctattttatgctcttatatcttcattaccttt
tttgtgtggttcttaaaatacttaactcggactagagatataggagcgaataaaaaagtt
gatgatctctttggtagcgcgagttgggaaactgaagagaaaatgatcaaagccaaactc
atcacgcccaacaataaaaaacgcgcctttgacaaacgagaggtgattgtaggcaggcgt
ggcttgggggattttatcgcttacgcagggcaggcgttcattggcttgattgctcctact
agaagcggtaagggggtgggtttcatcatgcccaatatgatcaattatcctcaaaatatc
gttgtgtttgaccctaaagctgacactatggagacttgcggaaaaatcagagaaaaacgc
ttcaaccaaaaagtgttcatctatgaacctttctccttaaaaacacaccgatttaatcct
ttcgcttatgtggattttggtaatgatgtggttttgaccgaagacatactctctcaaatt
gacacacgcctaaaagggcatggcatggtggctagtggaggggatttttccactcaaatc
tttggattagcaaagctcgtgttccctgaaagacctaatgaaaaagatcctttctttagc
aatcaagcgcgaaatctttttgtcatcaattgcaatatttacagggatctcatgtggact
aaaaaggggcttgagtttgtcaaaagaaaaaaaatcatcatgcctgaaacacccacgatg
tttttcataggttctatggcaagcgggatcaacttgattgatgaagacacaaacatggaa
aaagtcgtgtctttaatggaattttttggaggtgaagaagataagagtggcgataatcta
agagtgcttagtcctgccactagaaacatgtggaatagcttcaagacaatgggcggcgct
agagaaacttatagctcggttcaaggggtatacacttcagcctttgcgccttataataac
gcaatgattagaaatttcacgagcgccaatgattttgatttcaggcgtttaaggatcgat
gaagtgagtattggtgtgatcgctaatcctaaagaaagcactattgttggaccgatatta
gagctgtttttcaatgtgatgatttatagcaatttgattctgccaatccatgatccacag
tgcaaaagaagttgcttgatgctcatggacgaattcactttatgtggctatttagagacc
tttgttaaagcggtagggattatggcagaatacaacatgcgccccgcttttgtgtttcaa
agtaaggcgcaactagagaatgaccccccacttggttatggtaggaatggcgctaagact
attttagacaacctttctttgaatatgtattatgggattaacaacgataactactatgaa
cattttgaaaaactttctaaggtattagggaaatacacaaggcaagacgtgagccgaagc
attgatgataatacaggtaagaccaacacttctatcagcaacaaagagcggtttttgatg
acccctgatgaattgatgactatgggcgatgagcttatcattctagagaatacgctcaaa
cctatcaagtgccacaaggcgctttactatgatgatccattcttcaccgatgaactcatt
aaggtaagtccaagcttgagcaagaaatacaaattggggaaagtgcctaatcaagcaact
ttctatgatgatttgcaagccgctaaaactagaggtgaattgagttatgataaatcttta
gtgcctgtgggttcaagtgaactgtga

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