Helicobacter pylori Rif2: C730_02825
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Entry
C730_02825 CDS
T02318
Name
(GenBank) cag pathogenicity island protein (cag26)
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hei
Helicobacter pylori Rif2
Module
hei_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
DUF999
Motif
Other DBs
NCBI-ProteinID:
AFV44955
LinkDB
All DBs
Position
579930..583490
Genome browser
AA seq
1186 aa
AA seq
DB search
MTNETIDQTRTPDQTQSQTAFDPQQFINNLQVAFIKVDNVVASFDPDQKPIVDKNDRDNR
QAFDGISQLREEYSNKAIKNPTKKNQYFSDFIDKSNDLINKDNLIDVESSTKSFQKFGDQ
RYQIFTSWVSHQKDPSKINTRSIRNFMENIIQPPIPDDKEKAEFLKSAKQSFAGIIIGNQ
IRTDQKFMGVFDESLKERQEAEKNGGPTGGDWLDIFLSFIFNKKQSSDVKEAINQEPVPH
VQPDIATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIH
NNALSSVLMGSHNGIEPEKVSLLYAGNGGFGDKHDWNATVGYKDQQGNNVATLINVHMKN
GSGLVIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKVDFMEFLAQNNTKLDNLSE
KEKEKFQNEIEDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFNNGDLSYTLKDYGK
KADKALDREKNVTLQGSLKHDGVMFVDYSNFKYTNASKNPNKGVGATNGVSHLEAGFNKV
AVFNLPDLNNLAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAV
AEAKSTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQANSQKDEI
FALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKNGKNKDFSKA
EETLKALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDVI
INQKVTDKVDNLNQAVSVAKAMGDFSRVEQVLADLKNFSKEQLAQQAQKNEDFNTGKNSE
LYQSVKNSVNKTLVGNGLSGIEATALAKNFSDIKKELNEKFKNFNNNNNGLKNSTEPIYA
KVNKKKTGQVASPEEPIYTQVAKKVNAKIDRLNQIASGLGGVGQAAGFPLKRHDKVDDLS
KVGLSASPEPIYATIDDLGGPFPLKRHDKVDDLSKVGRSRNQELAQKIDNLNQAVSEAKA
GFFGNLEQTIDKLKDSTKKNVMNLYVESAKKVPASLSAKLDNYAINSHTRINSNIQNGAI
NEKATGMLTQKNPEWLKLVNDKIVAHNVGSVSLSEYDKIGFNQKNMKDYSDSFKFSTKLN
NAVKDIKSGFTHFLANAFSTGYYCLARENAEHGIKNVNTKGGFQKS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaactattgatcaaacaagaacaccagatcaaacacaaagccaaacagct
tttgatccgcaacaatttatcaataatcttcaagtggcttttattaaagttgataatgtt
gtcgcttcatttgatcctgatcaaaaaccaatcgttgataagaacgatagggataacagg
caagcttttgatggaatctcgcaattaagggaagaatactccaataaagcgatcaaaaat
cctaccaaaaagaatcagtatttttcagactttatcgataagagcaatgatttaatcaac
aaagacaatctcattgatgtagaatcttccacaaagagctttcagaaatttggggatcag
cgttaccaaattttcacaagttgggtgtcccatcaaaaagatccgtctaaaatcaacacc
cgatcgatccgaaattttatggaaaatatcatacaaccccctatccctgatgataaagaa
aaagcagagtttttgaaatctgccaaacaatcttttgcaggaatcattatagggaatcaa
atccgaacggatcaaaagttcatgggcgtgtttgatgaatccttgaaagaaaggcaagaa
gcagaaaaaaatggagggcctactggtggggattggttggatatttttctctcatttata
tttaacaaaaaacaatcttccgatgtcaaagaagcaatcaatcaagaaccagttccccat
gtccaaccagatatagccactactaccaccgacatacaaggcttaccgcctgaagctagg
gatttacttgatgaaaggggtaatttttctaaattcactcttggcgatatggaaatgtta
gatgttgagggagtcgctgacattgatcctaattacaagttcaatcaattattgattcac
aataacgctctgtcttctgtgttaatggggagtcataatggcatagaacctgaaaaagtt
tcattattgtatgcgggcaatggtggttttggagacaaacacgattggaacgccaccgtt
ggttataaagaccaacaaggtaacaatgtggctacactcattaatgtgcatatgaaaaac
ggcagtggcttagtcatagcaggtggtgagaaagggattaataaccctagtttttatctc
tacaaagaagaccaactcacaggctcacaacgagcattgagtcaagaagagatccgaaac
aaagtagatttcatggaatttcttgcacaaaataatactaaattagacaacttgagcgag
aaagagaaagaaaaattccaaaatgagattgaagattttcaaaaagactctaaggcttat
ttagacgccctagggaatgatcgtattgcttttgtttctaaaaaagacacaaaacattca
gctttaattactgagtttaataatggggatttgagctacactctcaaagattatgggaaa
aaagcagataaagctttagatagggagaaaaatgttactcttcaaggtagcctaaaacat
gatggcgtgatgtttgttgattattctaatttcaaatacaccaacgcctccaagaatccc
aataagggtgtaggcgctacgaatggcgtttcccatttagaagcaggctttaacaaggta
gctgtctttaatttgcctgatttaaataatctcgctatcactagtttcgtaaggcggaat
ttagagaataaactaaccgctaaaggattgtccctacaagaagctaataagctcatcaaa
gactttttgagcagcaacaaagaattggctggaaaagctttaaacttcaataaagctgta
gctgaagctaaaagcacaggcaactatgacgaggtgaaaaaagctcagaaagatcttgaa
aaatccctaaggaaacgagagcatttggagaaagaagtagagaaaaaattggagagcaaa
agcggcaacaaaaataaaatggaagcaaaagctcaagctaacagccaaaaagatgagatt
tttgcgttgatcaataaagaggctaatagggatgcaagagcaatcgcttacactcaaaat
cttaaaggcatcaaaagggaattgtctgataaacttgaaaaaatcagcaaggatttgaaa
gactttagtaaatcttttgatgaattcaaaaatggcaaaaataaggatttcagcaaggca
gaagaaacgctaaaagcccttaaaggctcggtgaaagatttaggtatcaatccagaatgg
atttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaaataag
gatttcagcaaggtaacgcaagcaaaaagcgaccttgaaaattccgttaaagatgtgatc
atcaatcaaaaggtaacggataaagttgacaatctcaatcaagcggtatcagtggctaaa
gcaatgggcgatttcagtagggtagagcaagtgttagccgatctcaaaaacttctcaaag
gagcaattggctcaacaagctcaaaaaaatgaagatttcaatactggaaaaaattctgaa
ctataccaatccgttaagaatagtgtaaataaaaccctagtcggtaatgggttatctgga
atagaggccacagctctcgccaaaaatttttcggatatcaagaaagaattgaatgagaaa
tttaaaaatttcaataacaataataatggactcaaaaacagcacagaacccatttatgct
aaagttaataaaaagaaaacaggacaagtagctagccctgaagaacccatttatactcaa
gttgctaaaaaggtaaatgcaaaaattgaccgactcaatcaaatagcaagtggtttgggt
ggtgtagggcaagcagcgggcttccctttgaaaaggcatgataaagttgatgatctcagt
aaggtagggctttcagctagccctgaacccatttacgctacgattgatgatctcggcgga
cctttccctttgaaaaggcatgataaagttgatgatctcagtaaggtagggcgatcaagg
aatcaagaattggctcagaaaattgacaatctcaatcaagcggtatcagaagctaaagca
ggtttttttggcaacctagagcaaacgatagacaagctcaaagattctacaaaaaagaat
gttatgaatctatatgttgaaagtgcaaaaaaagtgcctgctagtttgtcagcgaaattg
gacaattatgctattaacagccacacacgcattaatagcaatatccaaaatggagcaatc
aatgaaaaagcgaccggtatgctaacgcaaaaaaaccctgagtggcttaagctcgtgaat
gataagatagttgcgcataatgtgggaagcgtttctttgtcagagtatgataaaattggc
ttcaaccagaagaatatgaaagattattctgattcgttcaagttttccaccaagttgaac
aatgctgtaaaagacattaagtctggctttacgcactttttagccaatgcattttctaca
ggatattactgcttggcgagggaaaatgcggagcatggaatcaaaaatgttaatacaaaa
ggtggtttccaaaaatcttaa
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