Helicobacter pylori Rif2: C730_02925
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Entry
C730_02925 CDS
T02318
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei00300
Lysine biosynthesis
hei00470
D-Amino acid metabolism
hei01100
Metabolic pathways
hei01110
Biosynthesis of secondary metabolites
hei01120
Microbial metabolism in diverse environments
hei01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C730_02925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C730_02925 (dapF)
Enzymes [BR:
hei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C730_02925 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFV44971
LinkDB
All DBs
Position
complement(598057..598878)
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AA seq
273 aa
AA seq
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MVFYKYSGSGNDFLIVQSFKKKDFSNLAKQVCHRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHAIASKNHVFLAGKREISICIEEPNIIESNLGNYKILD
VIPALRCEKFFSSGSVLEHIPTFYLIDTGVPHLVGFVENKEGLNSLNTLELRALRHEFNA
NINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKKAALIPKSNESL
ELSLKNDGIFYKGAVRYIGMSVLGMRVFENGCF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaagtattcagggagcgggaatgattttttaatcgttcaaagtttcaaa
aaaaaagatttttcaaatttagccaaacaggtgtgccataggcatgagggttttggggct
gatgggcttgtagtcgtcttaccgagtaaggattatgactacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgcgggaatgcgagccgttgcgtggggttatttgct
taccagcatgctatagcctctaaaaaccatgtttttttagccggaaaaagagagatttct
atttgcatagaagaacccaatatcatagagagcaatcttggtaactacaaaatcctagat
gtaatacccgctttaagatgcgaaaaatttttttcaagcggcagcgttttagaacatatc
cctactttctatctcatagatacaggagtgccgcatttagtgggatttgtggaaaataaa
gaggggttaaattcccttaacacgctagaattaagggctttaaggcatgaatttaacgct
aatattaacatcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctggcttgcgggacaggcatggcggcggtttttatcgccgca
cgcattttttataacacgcctaaaaaagccgctctcatccctaaaagcaacgaatcttta
gagctttctttaaaaaatgatggaattttttataaaggcgcggtgcgttatattggcatg
agtgttttgggcatgagggtttttgaaaatgggtgtttttga
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