Helicobacter pylori Rif2: C730_03090
Help
Entry
C730_03090 CDS
T02318
Name
(GenBank) penicillin-binding protein 1A (PBP-1A)
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei00550
Peptidoglycan biosynthesis
hei01100
Metabolic pathways
hei01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C730_03090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C730_03090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hei01003
]
C730_03090
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hei01011
]
C730_03090
Enzymes [BR:
hei01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C730_03090
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C730_03090
Glycosyltransferases [BR:
hei01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C730_03090
Peptidoglycan biosynthesis and degradation proteins [BR:
hei01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C730_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AFV45004
LinkDB
All DBs
Position
complement(630852..632831)
Genome browser
AA seq
659 aa
AA seq
DB search
MLKKIFYGFIVLFLIVMGLLAILIAQVWVTTDKDIAKIKDYRPGVASQILDRKGRLIANI
YDKEFRFYARFEEIPPRFIESLLAVEDTLFFEHGGINLDAIMRAMIKNAKSGRYTEGGST
LTQQFVKNMVLTREKTLTRKLKEAIISIRIEKVLSKEEILERYLNQTFFGHGYYGVKTAS
LGYFKKPLDKLTLKEITMLVALPRAPSFYDPTKNLEFSLSRANDILRRLYSLGWISSNEL
KGALNEVPIVYNQTSTQNIAPYVVDEVLKQLDQLDGLKTQGYTIKLTIDLDYQRLALESL
RFGHQKILEKIAKEKPKTNASNEDEDNLNASMIVTDTSTGKILALVGGIDYKKSAFNRAT
QAKRQFGSAIKPFVYQIAFDNGYSTTSKIPDTARNFENGNYSKNSEQNHAWHPSNYSRKF
LGLVTLQEALSHSLNLATINLSDQLGFEKIYQSLSDMGFKNLPKDLSIVLGSFAISPIDA
AEKYSLFSNYGTMLKPMLIESITNQQNDVKTFTPMETKKITSKEQAFLTLSVLMDAVENG
TGSLARIKGLEIAGKTGTSNNNIDAWFIGFTPTLQSVIWFGRDDNTPISKGATGGVVSAP
VYSYFMRNILAIEPSLKRKFDVPKGLRKEIVDKIPYYSTPNSITPTPKRTDDSEERLLF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaagattttttatggttttatcgttttatttttgattgtcatggggttatta
gccattcttatcgctcaagtttgggtaactacggataaggatattgctaaaattaaagat
tatcgcccaggcgtcgcttcacagattttagaccgaaaagggcgtttgatcgctaatatc
tatgataaggaatttcgtttttatgcgcgttttgaagaaatccccccacgatttattgaa
agccttttagcggtagaagacaccctcttttttgaacatggggggatcaatttagacgct
atcatgcgcgctatgattaaaaacgctaaaagcggtcgttacaccgaggggggtagcacc
ctaacccaacaattcgttaaaaacatggtgctcacacgagaaaaaaccctaaccagaaaa
ctcaaagaagcgatcatttctatacgcattgaaaaagtcttaagcaaagaagaaatttta
gagcgttatttgaaccaaactttttttgggcatgggtattatggcgtgaaaaccgcaagt
ttagggtattttaaaaaaccccttgacaaactcacgcttaaagaaatcaccatgctagtc
gccttgcctagggctccgagtttttatgatcctaccaaaaatttagaattttcactctct
agggctaatgatattttaaggcggttgtattctttaggctggatttcttctaacgagctc
aaaggcgctctcaatgaagtgccaattgtttataaccaaacctccacgcaaaacatcgcc
ccctatgtcgtagatgaagtgttgaagcaattggatcaattagacgggttaaaaactcaa
ggctataccataaagctcacgatagatttggattaccaacgcttagcgttagagtccttg
cgttttgggcatcaaaaaatcttagaaaaaatcgctaaagaaaagccaaaaactaacgcg
tctaatgaagatgaagacaacttaaacgctagcatgatcgttacagacacgagcaccggt
aagattttagctttagtgggggggattgattataaaaaaagcgctttcaatcgcgccacg
caagccaaacggcagtttgggagcgcgataaagccttttgtgtatcagatcgcttttgat
aatggctattccacgacttctaaaatccctgataccgcgcgaaactttgaaaatggcaat
tatagtaaaaacagtgaacaaaaccacgcatggcaccccagcaattattctcgcaagttt
ttagggcttgtaaccttgcaagaagccttgagccattcgttaaatctagccacgatcaat
ttaagcgatcagcttggctttgaaaaaatttatcaatctttaagcgatatggggtttaaa
aacctccctaaggacttgtctattgtgttagggagctttgctatctcacccattgatgca
gctgaaaagtattctttattttctaattacggcaccatgctcaaacccatgctcattgaa
agcatcactaaccaacaaaacgatgtcaaaactttcacgcctatggaaaccaaaaagatc
acctccaaagaacaggcttttttaaccctttcagtgctgatggatgcggtagaaaatggc
acagggagtttggctcgcattaaaggtttagaaatcgccggtaaaaccgggacttctaac
aacaatattgacgcttggttcattggctttacccccaccttgcaaagcgtgatctggttt
gggagggacgataacacgcctattagcaaaggagcgacagggggtgttgtgagtgcgcct
gtgtattcgtatttcatgcgtaacattttagcgattgaaccttctttaaaaagaaagttt
gatgtccccaaaggcttgcgtaaagaaatcgtggataaaatcccctactattcaaccccc
aattccatcacccccacccccaaaagaacagacgatagcgaggaacgcttgttgttctaa
DBGET
integrated database retrieval system
