Helicobacter pylori Rif2: C730_03195
Help
Entry
C730_03195 CDS
T02318
Symbol
aspS
Name
(GenBank) aspartyl-tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hei
Helicobacter pylori Rif2
Pathway
hei00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C730_03195 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hei01007
]
C730_03195 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hei03016
]
C730_03195 (aspS)
03029 Mitochondrial biogenesis [BR:
hei03029
]
C730_03195 (aspS)
Enzymes [BR:
hei01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
C730_03195 (aspS)
Amino acid related enzymes [BR:
hei01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C730_03195 (aspS)
Transfer RNA biogenesis [BR:
hei03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C730_03195 (aspS)
Prokaryotic type
Other AARSs
C730_03195 (aspS)
Mitochondrial biogenesis [BR:
hei03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
C730_03195 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AFV45023
LinkDB
All DBs
Position
662103..663836
Genome browser
AA seq
577 aa
AA seq
DB search
MRSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEIGNKHVNEDL
RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCD
ENDVMGVVEDLLQEIFKAVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFR
DSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDE
IKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKD
ALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSI
RIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSI
RDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcatttttgcacagaaattagtgaaaaagatgtgggtaaaatagtcaaagtg
gccgggtggtgtaacacttatagagaccatggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaattagtctgtgatcctagctctaaggcttatgaaaaggcttta
gaagtcaggagtgaatttgtgctagtggctaaaggaaaagtgcgtttgagaggcgctggg
ttagaaaaccctaaactaaaaacgggtaaaattgaaatcgttttagaagagttaattatt
gaaaataaaagcgctaccccaccgattgaaattggcaacaaacatgtgaatgaggatttg
cgcttgaaataccgctatttggatttgcgctctcctaattcttatgaaatttttaaattg
cgcagcgaagtggctttaatcactcgtaacactctagcccaaaagggctttttagagatt
gaaacccccattttgtctaaaactacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgaatttttcgcgcttccccaaagtccgcaattgttcaaacagctt
ttaatggtggggggaatggataggtattttcaaatcgctcgttgctttagagatgaagat
ttaagagcggacaggcagccagaattcacgcagattgatgcagaaatgagtttttgtgat
gaaaacgatgtgatgggcgtggtggaagatttgttgcaagagatttttaaagcggttggg
catactatttctaaaccttttaaacgcatgccttataaggaagcgatggaaaattacggg
agcgacaagccggatttacgctttgaattgcctttaatagaagtgggggattgttttagg
gacagctcaaacgctattttttctaataccgcaaaagatcctaaaaacaaacgcatcaaa
gctttaaacgttaagggggctgatgcgctttttagccgcagcgttttaaaagaattagaa
gaatttgtgcgccaatttggggctaaaggcttagcgtatttgcaaattaaagaagatgaa
attaaaggacctttagttaaatttttaagcgaaaaggggcttaagaatattttagaaagg
actgatgcgcaagttggggatattgtcttttttggagccggggataaaaaaatcgtgtta
gattacatggggcgtttgcgcttgaaggtggctgaaacgcttgatctgattgataaagac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaaccgaaaacggctat
catgccgcgcaccacccttttacgatgcctaaaaatatagaatgcgaagatatagaagag
gttgaagcgcatgcgtatgatgtggtgcttaatggcgtggagcttggtggggggagcata
aggattcataaagaagaaatgcaaaaaaaagtctttgaaaaaatcaatatccatgaagaa
gaagcgcaaaaaaaatttggctttttattagaagcgctaaaatttggcgctcctcctcat
ggaggctttgcgataggatttgatcgcttgatcatgttaatgactaaatctcatagcatt
agagacgtgatcgctttccctaaaacgcaaaaagcttcatgcttattgacgaacgcgcct
agccccattaatgaagagcaactaagagaattacacattcgcttgagaaaataa
DBGET
integrated database retrieval system
