Helicobacter pylori Rif2: C730_03220
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Entry
C730_03220 CDS
T02318
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hei
Helicobacter pylori Rif2
Pathway
hei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C730_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hei03400
]
C730_03220
DNA repair and recombination proteins [BR:
hei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C730_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_21
AAA_22
AAA_15
Thiamine_BP
DsrC
Motif
Other DBs
NCBI-ProteinID:
AFV45028
LinkDB
All DBs
Position
complement(666420..668669)
Genome browser
AA seq
749 aa
AA seq
DB search
MMNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIALENDLKQTFTYLNEVDAIGLPTP
KSVKESDLIIIKLTKLGTLHLDEIFEIVKRLHYIVVLQNAFKTFTHLKFHERLNAIVLPP
FFNDLIALFDDEGKIKQGANATLDALNESLNRLKKESVKIIHHYARSKELAPYLVDTQSH
LKHGYECLLLKSGFSGAIKGVVLERSANGYFYLLPESAQKIAQKIAQIGNEIDCCIVEMC
QTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMILENFSHPI
LKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIPMKINAHHSIIPYFKE
IHAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEK
LLKQNNQIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETAL
RYGVPHFLIEKAKTFYGEDKEKLNVLIENSSALERELKQKNEHLENALKEQEYLKNAWLL
EMEKQKEIFHNKKLELEKSYQQALNILKSEVASKDTSSMHKEIHKASEILSKHKTNQEIP
QIITNFQANEKARYKNESVLIVQILDKGYYWIETELGMRLKAHGSLLKKIQKPPKNKFKP
PKTTIPKPKEASLRLDLRGQRSEEALDLLDAFLNDALLGGFEEVLICHGKGSGILEKFVK
EFLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataataataataccccacccaaacccctagaagaaagcctggatttaaaagag
tttatcgctctttttaaaaccttttttgccaaagaaagagatactattgctttagaaaac
gatctcaagcaaactttcacttatttaaacgaagtggatgcgatcggtttgcccacccct
aaaagcgtgaaagaaagcgatcttattatcatcaaactcaccaaattagggacgctccat
ttagatgaaatttttgagattgtcaaacgattgcactacattgtcgttttacaaaacgct
tttaaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccct
ttttttaacgatctgatcgctttatttgatgatgaagggaaaatcaaacaaggggctaac
gctaccctagacgctttgaatgaaagtttgaaccgccttaaaaaagagagcgtaaaaatc
attcaccattacgcccgctctaaagagcttgccccttatttagtggatacgcaaagccat
cttaagcatggttatgaatgccttttattgaaaagcgggttttctggcgcgattaaaggc
gttgtgctagaaaggagcgctaatggctatttctatcttttgcctgaaagcgcccaaaaa
atcgcccaaaaaatcgcccaaattggtaatgaaatagattgttgcattgttgaaatgtgc
caaactctaagccatagcttgcaaaaacaccttttatttttaaaattcctttttaaagaa
tttgattttttagacagcttgcaagcccggcttaatttcgctaaagcctacaatttagaa
tttgtcatgccaagctttacacaaaaaaaaatgattttagaaaacttttcacaccccatt
ttaaaagagccaaagcccttaaatttgaagtttgaaaaatccatgcttgctgttaccggc
gtgaatgcgggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagc
aagcatctcattcctatgaaaatcaacgcccatcattccattatcccctattttaaagaa
atccacgccattattaatgacccccaaaacagcgcgaacaatatctctacttttgccggc
agaatgaagcaatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaa
atagagctagggactgacgctgatgaagcgagcagtttgtataaaaccctgttagaaaaa
ttgcttaaacaaaacaaccaaatcattatcaccacgcaccacaaacgcttgagcgtgtta
atggcagaaaacaaggaagtggaattactagccgctctttatgatgaagaaaaagaacgg
cccacttacacttttttaaaaggggttattggcaaaagctatgcgtttgaaaccgctttg
cgctatggcgtgccgcattttttgattgaaaaagcgaaaaccttctatggcgaagataag
gaaaaattgaatgttttgattgaaaattccagcgcgctagaaagggaattgaaacaaaag
aatgaacatttagagaacgctttaaaagagcaagaatatttgaaaaacgcatggctttta
gaaatggaaaaacaaaaagaaatctttcacaataaaaaattggaattggaaaaatcctac
caacaagccctaaatatcttaaaaagcgaagtcgcttcaaaagatactagctccatgcat
aaagaaatccataaagcgagcgaaattttaagcaaacacaaaacaaaccaagagatccca
caaatcataacgaactttcaagccaacgaaaaagcgcgctacaagaatgaaagcgtgctg
attgtacaaattttagacaagggctattattggatagaaaccgagcttggcatgcgttta
aaagcgcatgggagtttgttgaaaaaaatccaaaaaccccctaaaaacaaattcaaaccc
cctaaaacaaccattcctaaacctaaagaagcgagcttgcgccttgatttaagggggcaa
cgcagcgaagaagccctggatttactagacgcttttttaaacgacgcgcttttagggggc
tttgaagaagtgctgatttgccacggcaaagggagcgggattttagaaaagtttgtgaaa
gaatttttaaaaaaccaccccaaagtggtgagctttagcgacgctcccattaatttaggc
ggcagtggggttaaaatcgttaaattgtag
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