Helicobacter pylori Rif2: C730_04770
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Entry
C730_04770 CDS
T02318
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hei
Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:
hei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hei03016
]
C730_04770 (truD)
Enzymes [BR:
hei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C730_04770 (truD)
Transfer RNA biogenesis [BR:
hei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C730_04770 (truD)
Prokaryotic type
C730_04770 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AFV45325
LinkDB
All DBs
Position
989195..990340
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AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQEKNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTKQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLS
VDSDTLKTLKNQAHPFKILEGDVMCHYPYGKFFDALELEKEGERFLKKEVAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFVENVTSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagtgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagtaac
acgggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttagaaatgctt
cagattttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaaaaaaccttaaaatcctgtctttgaattaccac
cacaataaaatcaaattggggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccctctaaacgctcaaaaaacaaagcaggttttagaacaaatcgcgcagtttgga
atgcctaattattttggctcgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttacaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttgattcagacactctaaaaacccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagggcgaaaggtttttgaaaaaagaagttgcgcctacggggttactagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
agtagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgtagaaaatgta
acttctcaatacgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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