KEGG   Helicobacter pylori Rif2: C730_05950
Entry
C730_05950        CDS       T02318                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hei  Helicobacter pylori Rif2
Pathway
hei02024  Quorum sensing
hei03060  Protein export
hei03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C730_05950
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C730_05950
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C730_05950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hei02044]
    C730_05950
Enzymes [BR:hei01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C730_05950
Secretion system [BR:hei02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C730_05950
  Eukaryotic Sec-SRP protein
   C730_05950
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 Zeta_toxin AAA_30 nSTAND3 AAA_24 cobW AAA_17 NPHP3_N AAA_19 ArsA_ATPase APS_kinase 6PF2K SLFN-g3_helicase AAA_14 AAA_16 Fer4_NifH NTPase_1 AAA_11 T2SSE AAA AAA_33 ABC_tran ParA Thymidylate_kin KTI12 NACHT AAA_5 ResIII AAA_18 TsaE ParBc YqeC
Other DBs
NCBI-ProteinID: AFV45551
LinkDB
Position
complement(1213538..1214884)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIASNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIVSLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcgttaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagatgaattgaaaaaaacgctcttaaaaaacgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaactaaacttaat
ggcattggtaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggtttcactttcgctcaaacgcccccaactgtggttttaatggcc
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctagcaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaagtt
aaagaaatcttaaacccccatgaagtgctgtatgtcgcagacgcattgagcgggcaagat
ggcgtcaaaagcgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgccttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagacgtgtttgtgcctgaa
agaattgtggggcgtttgatgggggctggagatattgtctcgctcgctgaaaaaaccgct
agcgttttaaaccctaatgaagccaaagatttaagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaagcgcgttaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggt
ttagaagtgtctgaaatcaatcgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaaccaataaaaagggtattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacgccccctaaaatgcgctaa

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